| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPFQTIQYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTLCARCSKPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:39)
[INFO] Main: Simulation completed successfully. (00:00:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.8522 | |
| 2 | S | A | 0.2026 | |
| 3 | D | A | -0.3743 | |
| 4 | V | A | -0.9352 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.6064 | |
| 7 | D | A | -3.6376 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.2079 | |
| 10 | V | A | 0.0698 | |
| 11 | V | A | 1.5213 | |
| 12 | A | A | 0.8787 | |
| 13 | A | A | 0.2850 | |
| 14 | T | A | -0.5488 | |
| 15 | P | A | -1.1549 | |
| 16 | T | A | -1.0174 | |
| 17 | S | A | -0.5511 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7044 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.2041 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.1888 | |
| 24 | A | A | -1.4073 | |
| 25 | P | A | 0.0814 | |
| 26 | F | A | 1.7850 | |
| 27 | Q | A | 0.8141 | |
| 28 | T | A | 0.4623 | |
| 29 | I | A | 0.0639 | |
| 30 | Q | A | -0.5413 | |
| 31 | Y | A | -0.2689 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -0.8404 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.5409 | |
| 36 | Y | A | -0.2379 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.5065 | |
| 39 | T | A | -1.2356 | |
| 40 | G | A | -1.2278 | |
| 41 | G | A | -1.3367 | |
| 42 | N | A | -1.5172 | |
| 43 | S | A | -0.8084 | |
| 44 | P | A | -0.2871 | |
| 45 | V | A | 0.4840 | |
| 46 | Q | A | -0.7594 | |
| 47 | E | A | -1.6307 | |
| 48 | F | A | -0.7555 | |
| 49 | T | A | -0.3317 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.9523 | |
| 52 | G | A | -1.0484 | |
| 53 | S | A | -1.2229 | |
| 54 | K | A | -2.0254 | |
| 55 | S | A | -1.4299 | |
| 56 | T | A | -0.7943 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2244 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6680 | |
| 61 | G | A | -1.0341 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3693 | |
| 64 | P | A | -1.6604 | |
| 65 | G | A | -1.4345 | |
| 66 | V | A | -1.4229 | |
| 67 | D | A | -2.0934 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.7822 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.1169 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.1214 | |
| 74 | A | A | 0.0000 | |
| 75 | V | A | 0.0742 | |
| 76 | T | A | 0.5061 | |
| 77 | L | A | 1.4545 | |
| 78 | C | A | 0.7990 | |
| 79 | A | A | -0.0152 | |
| 80 | R | A | -1.3854 | |
| 81 | C | A | -0.5170 | |
| 82 | S | A | -0.9608 | |
| 83 | K | A | -1.7673 | |
| 84 | P | A | -0.6112 | |
| 85 | I | A | -0.4869 | |
| 86 | S | A | -0.4159 | |
| 87 | I | A | -0.4967 | |
| 88 | N | A | -1.7237 | |
| 89 | Y | A | -1.4816 | |
| 90 | R | A | -2.5450 | |
| 91 | T | A | -1.5195 |