| Chain sequence(s) |
A: ATCDLLSGTGINHSACAAHCLLRGNRGGYCNGKAVCVCRN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:14)
[INFO] Main: Simulation completed successfully. (00:00:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.6418 | |
| 2 | T | A | 0.6099 | |
| 3 | C | A | 0.0000 | |
| 4 | D | A | -0.3993 | |
| 5 | L | A | 1.5140 | |
| 6 | L | A | 1.8923 | |
| 7 | S | A | 0.7233 | |
| 8 | G | A | -0.0010 | |
| 9 | T | A | -0.0273 | |
| 10 | G | A | 0.4789 | |
| 11 | I | A | 1.3521 | |
| 12 | N | A | 0.3826 | |
| 13 | H | A | -0.6930 | |
| 14 | S | A | -0.4477 | |
| 15 | A | A | -0.1378 | |
| 16 | C | A | 0.0000 | |
| 17 | A | A | -0.2716 | |
| 18 | A | A | -0.2075 | |
| 19 | H | A | -0.5609 | |
| 20 | C | A | 0.0000 | |
| 21 | L | A | 0.2596 | |
| 22 | L | A | 0.6291 | |
| 23 | R | A | -1.4527 | |
| 24 | G | A | -1.3135 | |
| 25 | N | A | -2.0023 | |
| 26 | R | A | -2.6654 | |
| 27 | G | A | -1.3452 | |
| 28 | G | A | 0.0000 | |
| 29 | Y | A | 0.4760 | |
| 30 | C | A | 0.0297 | |
| 31 | N | A | -1.0163 | |
| 32 | G | A | -1.2384 | |
| 33 | K | A | -2.0323 | |
| 34 | A | A | -0.3216 | |
| 35 | V | A | 0.7516 | |
| 36 | C | A | 0.5268 | |
| 37 | V | A | 0.8782 | |
| 38 | C | A | -0.7150 | |
| 39 | R | A | -2.5036 | |
| 40 | N | A | -3.0328 |