Project name: query_structure

Status: done

Started: 2026-03-16 22:54:50
Settings
Chain sequence(s) A: ATCDLLSGTGINHSACAAHCLLRGNRGGYCNGKAVCVCRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:14)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:14)
Show buried residues

Minimal score value
-3.0328
Maximal score value
1.8923
Average score
-0.281
Total score value
-11.2393

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 0.6418
2 T A 0.6099
3 C A 0.0000
4 D A -0.3993
5 L A 1.5140
6 L A 1.8923
7 S A 0.7233
8 G A -0.0010
9 T A -0.0273
10 G A 0.4789
11 I A 1.3521
12 N A 0.3826
13 H A -0.6930
14 S A -0.4477
15 A A -0.1378
16 C A 0.0000
17 A A -0.2716
18 A A -0.2075
19 H A -0.5609
20 C A 0.0000
21 L A 0.2596
22 L A 0.6291
23 R A -1.4527
24 G A -1.3135
25 N A -2.0023
26 R A -2.6654
27 G A -1.3452
28 G A 0.0000
29 Y A 0.4760
30 C A 0.0297
31 N A -1.0163
32 G A -1.2384
33 K A -2.0323
34 A A -0.3216
35 V A 0.7516
36 C A 0.5268
37 V A 0.8782
38 C A -0.7150
39 R A -2.5036
40 N A -3.0328
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Laboratory of Theory of Biopolymers 2018