| Chain sequence(s) |
A: MSHHHHHHSGKIKEFMRTFVGMSDNPFSEQMEEIITAGDQAVVNMDKFWDEFRRFHHEMYWHDPELPWIVVYEVRDVLKKFKPQAQQGSFNAEAFFTEMISVFKGNPEWVEKLHDWHFNHTFHRKFRDAKKNDPEEAKDVLKRAMAMFEVHVEITGKVPKWFERFMGDFLDHFDEEEIAQVINS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:09:05)
[INFO] Main: Simulation completed successfully. (00:09:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5497 | |
| 2 | S | A | -0.6172 | |
| 3 | H | A | -1.7414 | |
| 4 | H | A | -2.3306 | |
| 5 | H | A | -2.7388 | |
| 6 | H | A | -2.7656 | |
| 7 | H | A | -2.5405 | |
| 8 | H | A | -2.4739 | |
| 9 | S | A | -2.1687 | |
| 10 | G | A | -2.3819 | |
| 11 | K | A | -3.0454 | |
| 12 | I | A | -1.9840 | |
| 13 | K | A | -2.8588 | |
| 14 | E | A | -3.4833 | |
| 15 | F | A | 0.0000 | |
| 16 | M | A | 0.0000 | |
| 17 | R | A | -3.1466 | |
| 18 | T | A | -1.9850 | |
| 19 | F | A | 0.0000 | |
| 20 | V | A | 0.0000 | |
| 21 | G | A | -1.8823 | |
| 22 | M | A | 0.0000 | |
| 23 | S | A | -1.5953 | |
| 24 | D | A | -2.7029 | |
| 25 | N | A | -2.4857 | |
| 26 | P | A | -1.9365 | |
| 27 | F | A | 0.0000 | |
| 28 | S | A | 0.0000 | |
| 29 | E | A | -2.6662 | |
| 30 | Q | A | 0.0000 | |
| 31 | M | A | 0.0000 | |
| 32 | E | A | -2.3773 | |
| 33 | E | A | -1.7724 | |
| 34 | I | A | 0.0000 | |
| 35 | I | A | 0.0000 | |
| 36 | T | A | -1.2696 | |
| 37 | A | A | -0.9095 | |
| 38 | G | A | -1.4708 | |
| 39 | D | A | -2.1293 | |
| 40 | Q | A | -1.7589 | |
| 41 | A | A | 0.0000 | |
| 42 | V | A | 0.5539 | |
| 43 | V | A | 0.0000 | |
| 44 | N | A | -2.3644 | |
| 45 | M | A | 0.0000 | |
| 46 | D | A | -3.4702 | |
| 47 | K | A | -3.1371 | |
| 48 | F | A | 0.0000 | |
| 49 | W | A | -2.6797 | |
| 50 | D | A | -3.1712 | |
| 51 | E | A | -2.7268 | |
| 52 | F | A | 0.0000 | |
| 53 | R | A | -3.2027 | |
| 54 | R | A | -3.2421 | |
| 55 | F | A | -1.8178 | |
| 56 | H | A | 0.0000 | |
| 57 | H | A | -1.7416 | |
| 58 | E | A | -1.5175 | |
| 59 | M | A | 0.0000 | |
| 60 | Y | A | -0.5129 | |
| 61 | W | A | 0.1333 | |
| 62 | H | A | -0.9938 | |
| 63 | D | A | -1.2945 | |
| 64 | P | A | -1.1065 | |
| 65 | E | A | -2.1627 | |
| 66 | L | A | 0.0000 | |
| 67 | P | A | -0.2957 | |
| 68 | W | A | 1.0183 | |
| 69 | I | A | 1.6078 | |
| 70 | V | A | 0.0000 | |
| 71 | V | A | 0.0000 | |
| 72 | Y | A | 0.5814 | |
| 73 | E | A | -0.7390 | |
| 74 | V | A | 0.0000 | |
| 75 | R | A | -2.0878 | |
| 76 | D | A | -2.8375 | |
| 77 | V | A | 0.0000 | |
| 78 | L | A | 0.0000 | |
| 79 | K | A | -3.9268 | |
| 80 | K | A | -3.4007 | |
| 81 | F | A | 0.0000 | |
| 82 | K | A | -3.4913 | |
| 83 | P | A | -2.3431 | |
| 84 | Q | A | -2.3641 | |
| 85 | A | A | -2.2042 | |
| 86 | Q | A | -2.3385 | |
| 87 | Q | A | -2.3828 | |
| 88 | G | A | -1.8203 | |
| 89 | S | A | -1.7865 | |
| 90 | F | A | 0.0000 | |
| 91 | N | A | -1.6392 | |
| 92 | A | A | 0.0000 | |
| 93 | E | A | -1.4757 | |
| 94 | A | A | -0.7355 | |
| 95 | F | A | 0.0000 | |
| 96 | F | A | 0.0000 | |
| 97 | T | A | -0.3094 | |
| 98 | E | A | -0.6432 | |
| 99 | M | A | 0.0000 | |
| 100 | I | A | -0.3980 | |
| 101 | S | A | -0.9296 | |
| 102 | V | A | 0.0000 | |
| 103 | F | A | 0.0000 | |
| 104 | K | A | -2.2057 | |
| 105 | G | A | -1.4772 | |
| 106 | N | A | 0.0000 | |
| 107 | P | A | -2.1999 | |
| 108 | E | A | -2.7210 | |
| 109 | W | A | 0.0000 | |
| 110 | V | A | 0.0000 | |
| 111 | E | A | -2.0873 | |
| 112 | K | A | -1.9447 | |
| 113 | L | A | 0.0000 | |
| 114 | H | A | 0.0000 | |
| 115 | D | A | -1.1068 | |
| 116 | W | A | -0.7128 | |
| 117 | H | A | 0.0000 | |
| 118 | F | A | 0.0000 | |
| 119 | N | A | -1.1812 | |
| 120 | H | A | -1.5159 | |
| 121 | T | A | 0.0000 | |
| 122 | F | A | 0.0000 | |
| 123 | H | A | -2.2825 | |
| 124 | R | A | -3.3181 | |
| 125 | K | A | -3.2845 | |
| 126 | F | A | 0.0000 | |
| 127 | R | A | -3.6369 | |
| 128 | D | A | -4.5125 | |
| 129 | A | A | 0.0000 | |
| 130 | K | A | -3.8630 | |
| 131 | K | A | -3.8111 | |
| 132 | N | A | -3.9193 | |
| 133 | D | A | -4.0009 | |
| 134 | P | A | -3.6687 | |
| 135 | E | A | -3.9269 | |
| 136 | E | A | -4.3798 | |
| 137 | A | A | 0.0000 | |
| 138 | K | A | -3.0062 | |
| 139 | D | A | -3.4042 | |
| 140 | V | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | K | A | -2.1708 | |
| 143 | R | A | -2.1781 | |
| 144 | A | A | 0.0000 | |
| 145 | M | A | -0.5292 | |
| 146 | A | A | -0.8902 | |
| 147 | M | A | 0.0000 | |
| 148 | F | A | -0.7092 | |
| 149 | E | A | -2.0366 | |
| 150 | V | A | 0.0000 | |
| 151 | H | A | 0.0000 | |
| 152 | V | A | -1.2361 | |
| 153 | E | A | -2.4289 | |
| 154 | I | A | 0.0000 | |
| 155 | T | A | 0.0000 | |
| 156 | G | A | -1.5892 | |
| 157 | K | A | -1.6953 | |
| 158 | V | A | -0.1489 | |
| 159 | P | A | 0.0000 | |
| 160 | K | A | -2.3699 | |
| 161 | W | A | 0.0000 | |
| 162 | F | A | -1.3780 | |
| 163 | E | A | -2.8324 | |
| 164 | R | A | -3.1001 | |
| 165 | F | A | 0.0000 | |
| 166 | M | A | -1.1140 | |
| 167 | G | A | -1.7221 | |
| 168 | D | A | -1.9004 | |
| 169 | F | A | 0.0000 | |
| 170 | L | A | -0.5747 | |
| 171 | D | A | -1.9722 | |
| 172 | H | A | -2.2614 | |
| 173 | F | A | 0.0000 | |
| 174 | D | A | -3.3889 | |
| 175 | E | A | -3.6112 | |
| 176 | E | A | -3.6660 | |
| 177 | E | A | -3.0138 | |
| 178 | I | A | -1.8650 | |
| 179 | A | A | -1.8526 | |
| 180 | Q | A | -2.2572 | |
| 181 | V | A | 0.0000 | |
| 182 | I | A | 0.1959 | |
| 183 | N | A | -1.0257 | |
| 184 | S | A | -0.7846 |