| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGFTFRSFAIGWFRQAPGKGLEGVSSIGTSGSPTYYADSVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCAVLPGPLSGGDTYVSYYEYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:42)
[INFO] Main: Simulation completed successfully. (00:00:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.0900 | |
| 2 | V | A | -1.3200 | |
| 3 | Q | A | -1.5018 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.3974 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.2460 | |
| 8 | G | A | -0.5375 | |
| 9 | G | A | 0.2599 | |
| 10 | G | A | 0.7317 | |
| 11 | L | A | 1.3089 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.5042 | |
| 14 | P | A | -1.8648 | |
| 15 | G | A | -1.6054 | |
| 16 | G | A | -1.1007 | |
| 17 | S | A | -1.1634 | |
| 18 | L | A | -0.8304 | |
| 19 | R | A | -1.7699 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4697 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.4762 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.0477 | |
| 26 | G | A | -1.2541 | |
| 27 | F | A | -0.6608 | |
| 28 | T | A | -0.6374 | |
| 29 | F | A | 0.0000 | |
| 30 | R | A | -2.1729 | |
| 31 | S | A | -0.9748 | |
| 32 | F | A | -0.2355 | |
| 33 | A | A | 0.0000 | |
| 34 | I | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.2149 | |
| 40 | A | A | -1.3959 | |
| 41 | P | A | -1.3349 | |
| 42 | G | A | -1.5799 | |
| 43 | K | A | -2.5069 | |
| 44 | G | A | -1.8011 | |
| 45 | L | A | -0.9809 | |
| 46 | E | A | -1.3104 | |
| 47 | G | A | -0.2170 | |
| 48 | V | A | 0.0000 | |
| 49 | S | A | 0.0000 | |
| 50 | S | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | G | A | 0.0000 | |
| 53 | T | A | -0.8571 | |
| 54 | S | A | -0.9544 | |
| 55 | G | A | -0.8839 | |
| 56 | S | A | -0.4421 | |
| 57 | P | A | -0.3915 | |
| 58 | T | A | -0.1325 | |
| 59 | Y | A | -0.3436 | |
| 60 | Y | A | -0.8621 | |
| 61 | A | A | -1.4762 | |
| 62 | D | A | -2.5322 | |
| 63 | S | A | -1.8284 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.6283 | |
| 66 | G | A | -1.8170 | |
| 67 | R | A | -1.7717 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.8685 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.4963 | |
| 72 | R | A | -1.3531 | |
| 73 | D | A | -1.9580 | |
| 74 | N | A | -2.1262 | |
| 75 | A | A | -1.6488 | |
| 76 | K | A | -2.3385 | |
| 77 | N | A | -2.1971 | |
| 78 | T | A | -1.3284 | |
| 79 | L | A | 0.0000 | |
| 80 | Y | A | 0.0000 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.2262 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.4394 | |
| 85 | S | A | -1.4522 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -2.9599 | |
| 88 | A | A | -2.0647 | |
| 89 | E | A | -2.4976 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.5652 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | 0.7270 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | 0.2031 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | V | A | 0.0000 | |
| 99 | L | A | 0.0000 | |
| 100 | P | A | -0.2483 | |
| 101 | G | A | -0.2354 | |
| 102 | P | A | -0.2838 | |
| 103 | L | A | -0.0676 | |
| 104 | S | A | -0.4956 | |
| 105 | G | A | -0.6151 | |
| 106 | G | A | -0.1523 | |
| 107 | D | A | 0.3295 | |
| 108 | T | A | 0.6322 | |
| 109 | Y | A | 1.5620 | |
| 110 | V | A | 1.1143 | |
| 111 | S | A | 0.8335 | |
| 112 | Y | A | 1.2936 | |
| 113 | Y | A | 0.0000 | |
| 114 | E | A | -1.1664 | |
| 115 | Y | A | -0.5605 | |
| 116 | W | A | -0.1023 | |
| 117 | G | A | -0.2713 | |
| 118 | Q | A | -0.8415 | |
| 119 | G | A | -0.0148 | |
| 120 | T | A | 0.5272 | |
| 121 | L | A | 1.5271 | |
| 122 | V | A | 0.0000 | |
| 123 | T | A | 0.2426 | |
| 124 | V | A | 0.0000 | |
| 125 | S | A | -0.9210 |