| Chain sequence(s) |
B: LAAMEEMMARMEKRAEIMLKMAELASPEVVEKAKKEIEKMRERFAEMVAA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:25)
[INFO] Main: Simulation completed successfully. (00:02:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | 1.0886 | |
| 2 | A | B | -0.0493 | |
| 3 | A | B | -0.2161 | |
| 4 | M | B | -0.2725 | |
| 5 | E | B | -1.8898 | |
| 6 | E | B | -2.2703 | |
| 7 | M | B | -1.3628 | |
| 8 | M | B | -1.8816 | |
| 9 | A | B | -2.5798 | |
| 10 | R | B | -3.6771 | |
| 11 | M | B | -2.9235 | |
| 12 | E | B | -3.5085 | |
| 13 | K | B | -3.7980 | |
| 14 | R | B | -3.4696 | |
| 15 | A | B | 0.0000 | |
| 16 | E | B | -2.8391 | |
| 17 | I | B | -0.7108 | |
| 18 | M | B | -0.4232 | |
| 19 | L | B | -0.9516 | |
| 20 | K | B | -0.8471 | |
| 21 | M | B | 0.8510 | |
| 22 | A | B | 0.0000 | |
| 23 | E | B | -1.1732 | |
| 24 | L | B | 0.8955 | |
| 25 | A | B | 0.2420 | |
| 26 | S | B | -0.8223 | |
| 27 | P | B | -1.7631 | |
| 28 | E | B | -2.9275 | |
| 29 | V | B | -1.5732 | |
| 30 | V | B | -2.4858 | |
| 31 | E | B | -4.1959 | |
| 32 | K | B | -4.2379 | |
| 33 | A | B | 0.0000 | |
| 34 | K | B | -4.3574 | |
| 35 | K | B | -4.6758 | |
| 36 | E | B | -4.7311 | |
| 37 | I | B | 0.0000 | |
| 38 | E | B | -4.8910 | |
| 39 | K | B | -4.4458 | |
| 40 | M | B | -3.5020 | |
| 41 | R | B | -3.8878 | |
| 42 | E | B | -4.4474 | |
| 43 | R | B | -3.8532 | |
| 44 | F | B | 0.0000 | |
| 45 | A | B | -1.9628 | |
| 46 | E | B | -2.5039 | |
| 47 | M | B | -0.7105 | |
| 48 | V | B | -0.0767 | |
| 49 | A | B | -0.2972 | |
| 50 | A | B | -0.0144 |