| Chain sequence(s) |
A: MSHHHHHHSGPPWIAQPSEEEIEEFMTKFLRVVLTTLVKEGLIDKELADEFIEKGPSYFYENWEKVLESFYEKFKDLSLDEIVELSLKIYDLVMKALKENGIIPPESDKSSLAQWRRLHINHEVTWMAVDMVYYYGKKKGLPEEEIEKKMQEVFEKTSNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:40)
[INFO] Main: Simulation completed successfully. (00:08:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5552 | |
| 2 | S | A | -0.6221 | |
| 3 | H | A | -1.7551 | |
| 4 | H | A | -2.3436 | |
| 5 | H | A | -2.7669 | |
| 6 | H | A | -2.7744 | |
| 7 | H | A | -2.5128 | |
| 8 | H | A | -2.0921 | |
| 9 | S | A | -0.9141 | |
| 10 | G | A | -0.0021 | |
| 11 | P | A | 0.5620 | |
| 12 | P | A | 0.6982 | |
| 13 | W | A | 1.7810 | |
| 14 | I | A | 2.0361 | |
| 15 | A | A | 0.4352 | |
| 16 | Q | A | -0.6704 | |
| 17 | P | A | -1.5485 | |
| 18 | S | A | -2.7867 | |
| 19 | E | A | -3.8792 | |
| 20 | E | A | -4.3427 | |
| 21 | E | A | -4.0962 | |
| 22 | I | A | -2.8389 | |
| 23 | E | A | -3.8539 | |
| 24 | E | A | -3.8150 | |
| 25 | F | A | -1.9980 | |
| 26 | M | A | -1.6516 | |
| 27 | T | A | -1.8256 | |
| 28 | K | A | -2.1965 | |
| 29 | F | A | 0.0000 | |
| 30 | L | A | 0.0000 | |
| 31 | R | A | -1.6704 | |
| 32 | V | A | -1.2613 | |
| 33 | V | A | 0.0000 | |
| 34 | L | A | 0.0000 | |
| 35 | T | A | -1.3895 | |
| 36 | T | A | 0.0000 | |
| 37 | L | A | 0.0000 | |
| 38 | V | A | -1.9030 | |
| 39 | K | A | -2.1909 | |
| 40 | E | A | -1.3621 | |
| 41 | G | A | -1.5725 | |
| 42 | L | A | 0.0000 | |
| 43 | I | A | 0.0000 | |
| 44 | D | A | -3.5771 | |
| 45 | K | A | -4.1623 | |
| 46 | E | A | -3.8556 | |
| 47 | L | A | -2.8286 | |
| 48 | A | A | 0.0000 | |
| 49 | D | A | -4.1856 | |
| 50 | E | A | -3.2283 | |
| 51 | F | A | 0.0000 | |
| 52 | I | A | -2.3929 | |
| 53 | E | A | -3.1549 | |
| 54 | K | A | -2.9099 | |
| 55 | G | A | -1.8333 | |
| 56 | P | A | 0.0000 | |
| 57 | S | A | -0.8483 | |
| 58 | Y | A | -1.0906 | |
| 59 | F | A | 0.0000 | |
| 60 | Y | A | -0.5444 | |
| 61 | E | A | -1.9434 | |
| 62 | N | A | -1.6857 | |
| 63 | W | A | 0.0000 | |
| 64 | E | A | -2.9059 | |
| 65 | K | A | -2.3798 | |
| 66 | V | A | 0.0000 | |
| 67 | L | A | 0.0000 | |
| 68 | E | A | -3.0668 | |
| 69 | S | A | -2.4923 | |
| 70 | F | A | 0.0000 | |
| 71 | Y | A | -2.5115 | |
| 72 | E | A | -3.3101 | |
| 73 | K | A | -3.0284 | |
| 74 | F | A | -2.0424 | |
| 75 | K | A | -2.7102 | |
| 76 | D | A | -2.5506 | |
| 77 | L | A | -1.3535 | |
| 78 | S | A | -1.5485 | |
| 79 | L | A | 0.0000 | |
| 80 | D | A | -2.8089 | |
| 81 | E | A | -2.6913 | |
| 82 | I | A | 0.0000 | |
| 83 | V | A | 0.0000 | |
| 84 | E | A | -2.9187 | |
| 85 | L | A | -1.8118 | |
| 86 | S | A | 0.0000 | |
| 87 | L | A | -1.8398 | |
| 88 | K | A | -2.1570 | |
| 89 | I | A | 0.0000 | |
| 90 | Y | A | 0.0000 | |
| 91 | D | A | -2.2750 | |
| 92 | L | A | -1.6176 | |
| 93 | V | A | 0.0000 | |
| 94 | M | A | -1.8866 | |
| 95 | K | A | -2.8251 | |
| 96 | A | A | -2.1605 | |
| 97 | L | A | 0.0000 | |
| 98 | K | A | -3.2882 | |
| 99 | E | A | -3.4336 | |
| 100 | N | A | -2.8725 | |
| 101 | G | A | -2.2872 | |
| 102 | I | A | 0.0000 | |
| 103 | I | A | 0.0000 | |
| 104 | P | A | -2.0407 | |
| 105 | P | A | -2.3463 | |
| 106 | E | A | -2.9198 | |
| 107 | S | A | -2.0085 | |
| 108 | D | A | -2.4443 | |
| 109 | K | A | -2.7590 | |
| 110 | S | A | -1.6184 | |
| 111 | S | A | -0.8744 | |
| 112 | L | A | -0.3910 | |
| 113 | A | A | 0.0000 | |
| 114 | Q | A | -1.4161 | |
| 115 | W | A | 0.0165 | |
| 116 | R | A | -0.9462 | |
| 117 | R | A | -0.8949 | |
| 118 | L | A | 0.2018 | |
| 119 | H | A | -0.6114 | |
| 120 | I | A | 0.0000 | |
| 121 | N | A | 0.0000 | |
| 122 | H | A | -0.7894 | |
| 123 | E | A | -0.3270 | |
| 124 | V | A | 0.0000 | |
| 125 | T | A | 0.0000 | |
| 126 | W | A | 0.7148 | |
| 127 | M | A | 0.0000 | |
| 128 | A | A | 0.0000 | |
| 129 | V | A | 0.0000 | |
| 130 | D | A | 0.0868 | |
| 131 | M | A | 0.0000 | |
| 132 | V | A | 0.0000 | |
| 133 | Y | A | -0.5932 | |
| 134 | Y | A | -1.0680 | |
| 135 | Y | A | 0.0000 | |
| 136 | G | A | 0.0000 | |
| 137 | K | A | -2.4801 | |
| 138 | K | A | -2.8714 | |
| 139 | K | A | -2.4476 | |
| 140 | G | A | -2.0124 | |
| 141 | L | A | -1.7130 | |
| 142 | P | A | -2.3808 | |
| 143 | E | A | -3.8982 | |
| 144 | E | A | -4.2503 | |
| 145 | E | A | -3.5863 | |
| 146 | I | A | 0.0000 | |
| 147 | E | A | -4.3353 | |
| 148 | K | A | -4.2249 | |
| 149 | K | A | -2.9992 | |
| 150 | M | A | -2.0866 | |
| 151 | Q | A | -3.0863 | |
| 152 | E | A | -2.8508 | |
| 153 | V | A | 0.0000 | |
| 154 | F | A | -1.9364 | |
| 155 | E | A | -3.3289 | |
| 156 | K | A | -3.1438 | |
| 157 | T | A | 0.0000 | |
| 158 | S | A | -1.8123 | |
| 159 | N | A | -2.2328 | |
| 160 | S | A | -1.4631 |