| Chain sequence(s) |
A: AVIKEFMRFKVHMEGSSMNGHEFEIIEGEGEGRPYEGTQTAKLRVTKGGPLPFSWDILSPQFAAASRAFTKHPADIPDYWKQSFPPEGFKWERVVMNFEEDGGAVSVAQDTSSLEDGTLIYKVKLRGTNFPPDGPVMQKKTMGWEASTERLYPEDVVLKGDIKMALRLKDGGRYLADFKTTYRAKKPVQMPGAFNIDRKLLDIITSSHNEDYTVVEQYYEERSVARHS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:46)
[INFO] Main: Simulation completed successfully. (00:05:48)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 7 | A | A | -0.1786 | |
| 8 | V | A | 0.2367 | |
| 9 | I | A | 0.0000 | |
| 10 | K | A | -2.3150 | |
| 11 | E | A | -2.5666 | |
| 12 | F | A | -1.6387 | |
| 13 | M | A | 0.0000 | |
| 14 | R | A | -3.0309 | |
| 15 | F | A | 0.0000 | |
| 16 | K | A | -2.9701 | |
| 17 | V | A | 0.0000 | |
| 18 | H | A | -2.1841 | |
| 19 | M | A | 0.0000 | |
| 20 | E | A | -3.2035 | |
| 21 | G | A | 0.0000 | |
| 22 | S | A | 0.0000 | |
| 23 | M | A | 0.0000 | |
| 24 | N | A | -1.8821 | |
| 25 | G | A | -1.8358 | |
| 26 | H | A | -1.9091 | |
| 27 | E | A | -3.1485 | |
| 28 | F | A | 0.0000 | |
| 29 | E | A | -2.6649 | |
| 30 | I | A | 0.0000 | |
| 31 | E | A | -2.3873 | |
| 32 | G | A | 0.0000 | |
| 33 | E | A | -2.7385 | |
| 34 | G | A | 0.0000 | |
| 35 | E | A | -2.4012 | |
| 36 | G | A | 0.0000 | |
| 37 | R | A | -2.8732 | |
| 38 | P | A | 0.0000 | |
| 39 | Y | A | -1.4587 | |
| 40 | E | A | -2.5157 | |
| 41 | G | A | 0.0000 | |
| 42 | T | A | -1.4490 | |
| 43 | Q | A | 0.0000 | |
| 44 | T | A | -1.1807 | |
| 45 | A | A | 0.0000 | |
| 46 | K | A | -1.6808 | |
| 47 | L | A | 0.0000 | |
| 48 | R | A | -1.2021 | |
| 49 | V | A | -0.9346 | |
| 50 | T | A | -1.5565 | |
| 51 | K | A | -2.7841 | |
| 52 | G | A | -1.9512 | |
| 53 | G | A | -1.5998 | |
| 54 | P | A | -1.0792 | |
| 55 | L | A | 0.0000 | |
| 56 | P | A | -0.8698 | |
| 57 | F | A | 0.0000 | |
| 58 | S | A | 0.0000 | |
| 59 | W | A | 0.0000 | |
| 60 | D | A | 0.0000 | |
| 61 | I | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | S | A | 0.0000 | |
| 64 | P | A | -0.0328 | |
| 65 | Q | A | 0.0000 | |
| 66 | F | A | 0.0000 | |
| 70 | S | A | -0.0216 | |
| 71 | R | A | 0.0000 | |
| 72 | A | A | 0.0000 | |
| 73 | F | A | 0.0000 | |
| 74 | T | A | 0.0000 | |
| 75 | K | A | -1.5684 | |
| 76 | H | A | -1.1211 | |
| 77 | P | A | -1.0633 | |
| 78 | A | A | -1.0152 | |
| 79 | D | A | -2.1141 | |
| 80 | I | A | 0.0000 | |
| 81 | P | A | -1.0048 | |
| 82 | D | A | -0.8543 | |
| 83 | Y | A | 0.0000 | |
| 84 | W | A | 0.0000 | |
| 85 | K | A | -0.3320 | |
| 86 | Q | A | -0.6772 | |
| 87 | S | A | 0.0000 | |
| 88 | F | A | 0.0000 | |
| 89 | P | A | -0.9322 | |
| 90 | E | A | -1.7224 | |
| 91 | G | A | 0.0000 | |
| 92 | F | A | 0.0000 | |
| 93 | K | A | -2.0473 | |
| 94 | W | A | 0.0000 | |
| 95 | E | A | -1.6273 | |
| 96 | R | A | 0.0000 | |
| 97 | V | A | -0.7859 | |
| 98 | M | A | 0.0000 | |
| 99 | N | A | -1.8705 | |
| 100 | F | A | 0.0000 | |
| 101 | E | A | -2.6008 | |
| 102 | D | A | -2.1183 | |
| 103 | G | A | -1.7487 | |
| 104 | G | A | 0.0000 | |
| 105 | A | A | -1.4394 | |
| 106 | V | A | 0.0000 | |
| 107 | S | A | -1.2392 | |
| 108 | V | A | 0.0000 | |
| 109 | A | A | -1.5321 | |
| 110 | Q | A | 0.0000 | |
| 111 | D | A | -1.7662 | |
| 112 | T | A | 0.0000 | |
| 113 | S | A | -1.0406 | |
| 114 | L | A | -1.1050 | |
| 115 | E | A | -2.5324 | |
| 116 | D | A | -2.6692 | |
| 117 | G | A | -2.0863 | |
| 118 | T | A | -2.2747 | |
| 119 | L | A | 0.0000 | |
| 120 | I | A | -1.5275 | |
| 121 | Y | A | 0.0000 | |
| 122 | K | A | -2.4276 | |
| 123 | V | A | 0.0000 | |
| 124 | K | A | -2.9802 | |
| 125 | L | A | 0.0000 | |
| 126 | R | A | -2.8046 | |
| 127 | G | A | 0.0000 | |
| 128 | T | A | -1.5495 | |
| 129 | N | A | -1.7468 | |
| 130 | F | A | 0.0000 | |
| 131 | P | A | -1.5459 | |
| 132 | P | A | -1.6426 | |
| 133 | D | A | -2.4585 | |
| 134 | G | A | -1.7453 | |
| 135 | P | A | -2.0088 | |
| 136 | V | A | 0.0000 | |
| 137 | M | A | -1.5565 | |
| 138 | Q | A | -2.4590 | |
| 139 | K | A | -2.2347 | |
| 140 | K | A | -2.6869 | |
| 141 | T | A | 0.0000 | |
| 142 | M | A | -1.0992 | |
| 143 | G | A | -0.7122 | |
| 144 | W | A | 0.0000 | |
| 145 | E | A | -1.3668 | |
| 146 | A | A | -0.9027 | |
| 147 | S | A | -1.1238 | |
| 148 | T | A | -1.3418 | |
| 149 | E | A | 0.0000 | |
| 150 | R | A | -2.6516 | |
| 151 | L | A | 0.0000 | |
| 152 | Y | A | -0.9708 | |
| 153 | P | A | -0.8742 | |
| 154 | E | A | -1.9518 | |
| 155 | D | A | -1.5729 | |
| 156 | V | A | 0.1387 | |
| 157 | V | A | -0.5664 | |
| 158 | L | A | 0.0000 | |
| 159 | K | A | -1.6987 | |
| 160 | G | A | 0.0000 | |
| 161 | D | A | -2.2986 | |
| 162 | I | A | 0.0000 | |
| 163 | K | A | -2.7018 | |
| 164 | M | A | 0.0000 | |
| 165 | A | A | 0.0000 | |
| 166 | L | A | 0.0000 | |
| 167 | R | A | -2.6343 | |
| 168 | L | A | -2.7593 | |
| 169 | K | A | -3.3156 | |
| 170 | D | A | -3.2565 | |
| 171 | G | A | -2.6240 | |
| 172 | G | A | -2.4784 | |
| 173 | R | A | -2.8708 | |
| 174 | Y | A | 0.0000 | |
| 175 | L | A | -1.7766 | |
| 176 | A | A | 0.0000 | |
| 177 | D | A | -2.8532 | |
| 178 | F | A | 0.0000 | |
| 179 | K | A | -2.6262 | |
| 180 | T | A | 0.0000 | |
| 181 | T | A | 0.0000 | |
| 182 | Y | A | 0.0000 | |
| 183 | R | A | -1.4059 | |
| 184 | A | A | -1.1136 | |
| 185 | K | A | -1.5978 | |
| 186 | K | A | -1.1394 | |
| 187 | P | A | -0.4887 | |
| 188 | V | A | -0.4158 | |
| 189 | Q | A | -0.9162 | |
| 190 | M | A | -0.4794 | |
| 191 | P | A | 0.0000 | |
| 192 | G | A | -0.9540 | |
| 193 | A | A | -0.9590 | |
| 194 | F | A | 0.0000 | |
| 195 | N | A | -1.5816 | |
| 196 | I | A | 0.0000 | |
| 197 | D | A | -1.4080 | |
| 198 | R | A | -1.2484 | |
| 199 | K | A | -1.5089 | |
| 200 | L | A | -0.9771 | |
| 201 | D | A | -1.2633 | |
| 202 | I | A | -0.4927 | |
| 203 | T | A | -0.6360 | |
| 204 | S | A | -0.9937 | |
| 205 | H | A | -1.5672 | |
| 206 | N | A | -1.7348 | |
| 207 | E | A | -2.4974 | |
| 208 | D | A | -1.9295 | |
| 209 | Y | A | -1.0528 | |
| 210 | T | A | -0.8016 | |
| 211 | V | A | -0.5421 | |
| 212 | V | A | 0.0000 | |
| 213 | E | A | -1.3194 | |
| 214 | Q | A | 0.0000 | |
| 215 | Y | A | -0.5157 | |
| 216 | E | A | -0.9466 | |
| 217 | R | A | -2.1254 | |
| 218 | S | A | 0.0000 | |
| 219 | V | A | -0.9737 | |
| 220 | A | A | 0.0000 | |
| 221 | R | A | -1.7689 | |
| 222 | H | A | -1.9981 | |
| 223 | S | A | -1.2712 |