| Chain sequence(s) |
A: MEMKNMVVGLFLIAAFALPALATNFEKDFITHETVQAILKKVGPSSNGMLDEQTISALTGKTIISNPVLEEALLTHSNSINALGGTLPCGESCVWIPCISSVVGCSCKSKVCYKNSLA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:04)
[INFO] Main: Simulation completed successfully. (00:02:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.1127 | |
| 2 | E | A | -1.3177 | |
| 3 | M | A | -0.1506 | |
| 4 | K | A | -1.3034 | |
| 5 | N | A | -0.8495 | |
| 6 | M | A | 1.0566 | |
| 7 | V | A | 2.0435 | |
| 8 | V | A | 2.6815 | |
| 9 | G | A | 2.5740 | |
| 10 | L | A | 4.0641 | |
| 11 | F | A | 4.6578 | |
| 12 | L | A | 4.0840 | |
| 13 | I | A | 4.4917 | |
| 14 | A | A | 3.2968 | |
| 15 | A | A | 3.0203 | |
| 16 | F | A | 3.4799 | |
| 17 | A | A | 2.5414 | |
| 18 | L | A | 2.7901 | |
| 19 | P | A | 1.4822 | |
| 20 | A | A | 1.2890 | |
| 21 | L | A | 1.8280 | |
| 22 | A | A | 0.8978 | |
| 23 | T | A | -0.0472 | |
| 24 | N | A | -0.5658 | |
| 25 | F | A | 0.0410 | |
| 26 | E | A | -2.2305 | |
| 27 | K | A | -2.3435 | |
| 28 | D | A | -1.3738 | |
| 29 | F | A | 1.3196 | |
| 30 | I | A | 1.5003 | |
| 31 | T | A | -0.0343 | |
| 32 | H | A | -1.2441 | |
| 33 | E | A | -1.9376 | |
| 34 | T | A | -0.4770 | |
| 35 | V | A | -0.1267 | |
| 36 | Q | A | -1.3770 | |
| 37 | A | A | -0.6274 | |
| 38 | I | A | 1.0560 | |
| 39 | L | A | 1.0249 | |
| 40 | K | A | -1.0876 | |
| 41 | K | A | -0.8539 | |
| 42 | V | A | 1.0145 | |
| 43 | G | A | -0.1716 | |
| 44 | P | A | -0.7174 | |
| 45 | S | A | -1.0015 | |
| 46 | S | A | -0.8362 | |
| 47 | N | A | -1.1233 | |
| 48 | G | A | -0.4366 | |
| 49 | M | A | 0.2079 | |
| 50 | L | A | 0.2444 | |
| 51 | D | A | -1.8824 | |
| 52 | E | A | -2.2700 | |
| 53 | Q | A | -1.9516 | |
| 54 | T | A | -0.4981 | |
| 55 | I | A | 0.2985 | |
| 56 | S | A | -0.6814 | |
| 57 | A | A | -0.2888 | |
| 58 | L | A | 1.0759 | |
| 59 | T | A | 0.4023 | |
| 60 | G | A | -0.4298 | |
| 61 | K | A | -0.8003 | |
| 62 | T | A | 0.7975 | |
| 63 | I | A | 2.5608 | |
| 64 | I | A | 2.4272 | |
| 65 | S | A | 0.9940 | |
| 66 | N | A | 0.0554 | |
| 67 | P | A | -0.2563 | |
| 68 | V | A | 0.8200 | |
| 69 | L | A | 0.8907 | |
| 70 | E | A | -0.7865 | |
| 71 | E | A | -1.0817 | |
| 72 | A | A | 0.1367 | |
| 73 | L | A | 0.9338 | |
| 74 | L | A | 0.7492 | |
| 75 | T | A | -0.3325 | |
| 76 | H | A | -0.8330 | |
| 77 | S | A | -0.6243 | |
| 78 | N | A | -1.4587 | |
| 79 | S | A | -0.7831 | |
| 80 | I | A | 0.3402 | |
| 81 | N | A | -0.8336 | |
| 82 | A | A | 0.1189 | |
| 83 | L | A | 1.2576 | |
| 84 | G | A | 0.1528 | |
| 85 | G | A | 0.1022 | |
| 86 | T | A | 0.4511 | |
| 87 | L | A | 0.8646 | |
| 88 | P | A | 0.0214 | |
| 89 | C | A | 0.1917 | |
| 90 | G | A | -0.4291 | |
| 91 | E | A | -0.0027 | |
| 92 | S | A | 0.2256 | |
| 93 | C | A | 0.8965 | |
| 94 | V | A | 1.3227 | |
| 95 | W | A | 2.1999 | |
| 96 | I | A | 2.5752 | |
| 97 | P | A | 1.3959 | |
| 98 | C | A | 0.0000 | |
| 99 | I | A | 2.6872 | |
| 100 | S | A | 1.7465 | |
| 101 | S | A | 1.4862 | |
| 102 | V | A | 2.8222 | |
| 103 | V | A | 2.3228 | |
| 104 | G | A | 0.4534 | |
| 105 | C | A | 0.0000 | |
| 106 | S | A | -0.1840 | |
| 107 | C | A | -0.5782 | |
| 108 | K | A | -1.0936 | |
| 109 | S | A | -1.1527 | |
| 110 | K | A | -1.1778 | |
| 111 | V | A | -0.6350 | |
| 112 | C | A | 0.0000 | |
| 113 | Y | A | -0.4679 | |
| 114 | K | A | -0.7320 | |
| 115 | N | A | -0.9838 | |
| 116 | S | A | -0.4562 | |
| 117 | L | A | 0.7520 | |
| 118 | A | A | 0.3654 |