| Chain sequence(s) |
A: QPQKCQREFQQEQHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGTCPFIAI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:44)
[INFO] Main: Simulation completed successfully. (00:01:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.7683 | |
| 2 | P | A | -1.7206 | |
| 3 | Q | A | -2.8952 | |
| 4 | K | A | -3.2755 | |
| 5 | C | A | 0.0000 | |
| 6 | Q | A | -3.1644 | |
| 7 | R | A | -4.3250 | |
| 8 | E | A | -3.9113 | |
| 9 | F | A | 0.0000 | |
| 10 | Q | A | -3.7508 | |
| 11 | Q | A | -3.8618 | |
| 12 | E | A | -4.0491 | |
| 13 | Q | A | -3.6665 | |
| 14 | H | A | -2.7475 | |
| 15 | L | A | 0.0000 | |
| 16 | R | A | -2.8771 | |
| 17 | A | A | -2.2937 | |
| 18 | C | A | 0.0000 | |
| 19 | Q | A | -1.9198 | |
| 20 | Q | A | -2.0673 | |
| 21 | W | A | 0.0000 | |
| 22 | I | A | 0.0000 | |
| 23 | R | A | -1.6007 | |
| 24 | Q | A | -1.5314 | |
| 25 | Q | A | -1.2742 | |
| 26 | L | A | -0.9725 | |
| 27 | A | A | -0.6949 | |
| 28 | G | A | -0.6387 | |
| 29 | S | A | -0.2850 | |
| 30 | P | A | 0.0848 | |
| 31 | F | A | 0.8872 | |
| 32 | S | A | -0.9075 | |
| 33 | E | A | -2.3029 | |
| 34 | N | A | -2.3421 | |
| 35 | Q | A | -1.8822 | |
| 36 | W | A | -0.1427 | |
| 37 | G | A | -1.0110 | |
| 38 | P | A | -1.0730 | |
| 39 | Q | A | -1.7357 | |
| 40 | Q | A | -1.5261 | |
| 41 | G | A | -1.3821 | |
| 42 | P | A | -1.6057 | |
| 43 | S | A | -1.3791 | |
| 44 | L | A | -1.7766 | |
| 45 | R | A | -2.3655 | |
| 46 | E | A | -2.7627 | |
| 47 | Q | A | -2.5979 | |
| 48 | C | A | 0.0000 | |
| 49 | C | A | 0.0000 | |
| 50 | N | A | -2.1923 | |
| 51 | E | A | -1.8672 | |
| 52 | L | A | 0.0000 | |
| 53 | Y | A | -0.8875 | |
| 54 | Q | A | -1.6911 | |
| 55 | E | A | -1.4613 | |
| 56 | D | A | -1.8135 | |
| 57 | Q | A | -1.0639 | |
| 58 | V | A | 0.1558 | |
| 59 | C | A | -0.9964 | |
| 60 | V | A | 0.0000 | |
| 61 | C | A | -0.2733 | |
| 62 | P | A | -0.5273 | |
| 63 | T | A | 0.0000 | |
| 64 | L | A | 0.0000 | |
| 65 | K | A | -0.5310 | |
| 66 | Q | A | -1.1122 | |
| 67 | A | A | 0.0000 | |
| 68 | A | A | 0.0000 | |
| 69 | K | A | -0.8382 | |
| 70 | S | A | -0.8145 | |
| 71 | V | A | 0.0000 | |
| 72 | R | A | -1.2629 | |
| 73 | V | A | 0.1639 | |
| 74 | Q | A | -1.1668 | |
| 75 | G | A | -1.2225 | |
| 76 | Q | A | -1.4459 | |
| 77 | H | A | -0.9052 | |
| 78 | G | A | -0.1761 | |
| 79 | P | A | 0.2709 | |
| 80 | F | A | 1.2855 | |
| 81 | Q | A | -0.4329 | |
| 82 | S | A | 0.0000 | |
| 83 | T | A | 0.1644 | |
| 84 | R | A | -1.1688 | |
| 85 | I | A | 0.0000 | |
| 86 | Y | A | 0.0000 | |
| 87 | Q | A | -1.3069 | |
| 88 | I | A | 0.0000 | |
| 89 | A | A | 0.0000 | |
| 90 | K | A | -1.2511 | |
| 91 | N | A | -1.4651 | |
| 92 | L | A | 0.0000 | |
| 93 | P | A | 0.0000 | |
| 94 | N | A | -2.4378 | |
| 95 | V | A | -1.4019 | |
| 96 | C | A | 0.0000 | |
| 97 | N | A | -2.2640 | |
| 98 | M | A | 0.0000 | |
| 99 | K | A | -2.9373 | |
| 100 | Q | A | -2.3816 | |
| 101 | I | A | -1.2617 | |
| 102 | G | A | -1.8353 | |
| 103 | T | A | -1.0897 | |
| 104 | C | A | 0.0000 | |
| 105 | P | A | 0.1062 | |
| 106 | F | A | 0.9757 | |
| 107 | I | A | 2.3127 | |
| 108 | A | A | 1.4307 | |
| 109 | I | A | 2.4135 |