| Chain sequence(s) |
L: KYDGVARFFDVMED
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:19)
[INFO] Main: Simulation completed successfully. (00:00:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 379 | K | L | -1.6235 | |
| 380 | Y | L | -0.2047 | |
| 381 | D | L | -1.7982 | |
| 382 | G | L | -0.4692 | |
| 383 | V | L | 1.6965 | |
| 384 | A | L | 0.0330 | |
| 385 | R | L | -1.5133 | |
| 386 | F | L | 1.9573 | |
| 387 | F | L | 2.3120 | |
| 388 | D | L | 0.1579 | |
| 389 | V | L | 1.7999 | |
| 390 | M | L | 0.8517 | |
| 391 | E | L | -2.0203 | |
| 392 | D | L | -2.1131 |