| Chain sequence(s) |
A: FGGHKGG
C: FGGHKGG B: FGGHKGG E: FGGHKGG D: FGGHKGG G: FGGHKGG F: FGGHKGG I: FGGHKGG H: FGGHKGG K: FGGHKGG J: FGGHKGG M: FGGHKGG L: FGGHKGG O: FGGHKGG N: FGGHKGG Q: FGGHKGG P: FGGHKGG S: FGGHKGG R: FGGHKGG T: FGGHKGG input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:13)
[INFO] Main: Simulation completed successfully. (00:02:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 2.7980 | |
| 2 | G | A | 0.0000 | |
| 3 | G | A | -1.1934 | |
| 4 | H | A | -3.2309 | |
| 5 | K | A | -3.4830 | |
| 6 | G | A | -2.7312 | |
| 7 | G | A | -1.7826 | |
| 1 | F | B | 2.4803 | |
| 2 | G | B | 0.0295 | |
| 3 | G | B | -1.1444 | |
| 4 | H | B | -2.1620 | |
| 5 | K | B | -2.6741 | |
| 6 | G | B | -1.8287 | |
| 7 | G | B | -1.1877 | |
| 1 | F | C | 2.9295 | |
| 2 | G | C | 0.0000 | |
| 3 | G | C | -0.3309 | |
| 4 | H | C | -2.1201 | |
| 5 | K | C | -2.9137 | |
| 6 | G | C | -2.9093 | |
| 7 | G | C | -2.0538 | |
| 1 | F | D | 1.5752 | |
| 2 | G | D | -0.4434 | |
| 3 | G | D | -1.7826 | |
| 4 | H | D | -2.9696 | |
| 5 | K | D | -3.4064 | |
| 6 | G | D | -1.9498 | |
| 7 | G | D | -1.3082 | |
| 1 | F | E | 2.7799 | |
| 2 | G | E | 0.5251 | |
| 3 | G | E | -1.2872 | |
| 4 | H | E | -2.8783 | |
| 5 | K | E | -3.4143 | |
| 6 | G | E | -2.4068 | |
| 7 | G | E | -1.3356 | |
| 1 | F | F | 3.2533 | |
| 2 | G | F | 1.0998 | |
| 3 | G | F | -1.0290 | |
| 4 | H | F | -2.8727 | |
| 5 | K | F | -3.6008 | |
| 6 | G | F | -2.5408 | |
| 7 | G | F | -1.6017 | |
| 1 | F | G | 3.2074 | |
| 2 | G | G | 0.7423 | |
| 3 | G | G | -1.1413 | |
| 4 | H | G | -2.9237 | |
| 5 | K | G | -3.7324 | |
| 6 | G | G | -2.7296 | |
| 7 | G | G | -1.6440 | |
| 1 | F | H | 3.4274 | |
| 2 | G | H | 1.1978 | |
| 3 | G | H | -0.7955 | |
| 4 | H | H | -2.8220 | |
| 5 | K | H | -3.6025 | |
| 6 | G | H | -2.6652 | |
| 7 | G | H | -1.6963 | |
| 1 | F | I | 3.6775 | |
| 2 | G | I | 1.7817 | |
| 3 | G | I | -0.7626 | |
| 4 | H | I | -2.5552 | |
| 5 | K | I | -3.5976 | |
| 6 | G | I | -2.7011 | |
| 7 | G | I | -1.9118 | |
| 1 | F | J | 3.1083 | |
| 2 | G | J | 0.9931 | |
| 3 | G | J | -1.0615 | |
| 4 | H | J | -2.8014 | |
| 5 | K | J | -3.7560 | |
| 6 | G | J | -2.7856 | |
| 7 | G | J | -1.7972 | |
| 1 | F | K | 2.6936 | |
| 2 | G | K | 0.4037 | |
| 3 | G | K | -1.2127 | |
| 4 | H | K | -2.9790 | |
| 5 | K | K | -3.9034 | |
| 6 | G | K | -2.8736 | |
| 7 | G | K | -1.7278 | |
| 1 | F | L | 2.6827 | |
| 2 | G | L | 0.2032 | |
| 3 | G | L | -1.4528 | |
| 4 | H | L | -3.1818 | |
| 5 | K | L | -3.5397 | |
| 6 | G | L | -2.3858 | |
| 7 | G | L | -1.6708 | |
| 1 | F | M | 2.8381 | |
| 2 | G | M | 0.0000 | |
| 3 | G | M | -1.0695 | |
| 4 | H | M | -2.7529 | |
| 5 | K | M | -3.5910 | |
| 6 | G | M | -2.6892 | |
| 7 | G | M | -1.5515 | |
| 1 | F | N | 0.0000 | |
| 2 | G | N | -0.1920 | |
| 3 | G | N | -1.7422 | |
| 4 | H | N | -3.2895 | |
| 5 | K | N | -3.6199 | |
| 6 | G | N | -2.4470 | |
| 7 | G | N | -1.5491 | |
| 1 | F | O | 2.4096 | |
| 2 | G | O | 0.0703 | |
| 3 | G | O | -1.6561 | |
| 4 | H | O | -2.8793 | |
| 5 | K | O | -3.5324 | |
| 6 | G | O | -2.4607 | |
| 7 | G | O | -1.5628 | |
| 1 | F | P | 2.8033 | |
| 2 | G | P | 0.7473 | |
| 3 | G | P | -1.5104 | |
| 4 | H | P | -3.1037 | |
| 5 | K | P | -3.7347 | |
| 6 | G | P | -2.5483 | |
| 7 | G | P | -1.6710 | |
| 1 | F | Q | 3.2074 | |
| 2 | G | Q | 1.3591 | |
| 3 | G | Q | -1.2269 | |
| 4 | H | Q | -2.3326 | |
| 5 | K | Q | -3.3739 | |
| 6 | G | Q | -2.5331 | |
| 7 | G | Q | -1.5516 | |
| 1 | F | R | 3.2924 | |
| 2 | G | R | 0.0000 | |
| 3 | G | R | -0.9265 | |
| 4 | H | R | -2.8673 | |
| 5 | K | R | -3.5919 | |
| 6 | G | R | -2.7457 | |
| 7 | G | R | -1.8791 | |
| 1 | F | S | 3.2828 | |
| 2 | G | S | 1.2888 | |
| 3 | G | S | -0.7610 | |
| 4 | H | S | -2.5847 | |
| 5 | K | S | -3.4613 | |
| 6 | G | S | -2.7030 | |
| 7 | G | S | -1.5892 | |
| 1 | F | T | 1.9960 | |
| 2 | G | T | 0.0000 | |
| 3 | G | T | -1.1961 | |
| 4 | H | T | -3.0989 | |
| 5 | K | T | -3.2822 | |
| 6 | G | T | -2.3476 | |
| 7 | G | T | -1.3569 |