Project name: FGGHKGG20

Status: done

Started: 2026-05-21 14:07:22
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Chain sequence(s) A: FGGHKGG
C: FGGHKGG
B: FGGHKGG
E: FGGHKGG
D: FGGHKGG
G: FGGHKGG
F: FGGHKGG
I: FGGHKGG
H: FGGHKGG
K: FGGHKGG
J: FGGHKGG
M: FGGHKGG
L: FGGHKGG
O: FGGHKGG
N: FGGHKGG
Q: FGGHKGG
P: FGGHKGG
S: FGGHKGG
R: FGGHKGG
T: FGGHKGG
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:17)
Show buried residues

Minimal score value
-3.9034
Maximal score value
3.6775
Average score
-1.2047
Total score value
-168.6612

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 2.7980
2 G A 0.0000
3 G A -1.1934
4 H A -3.2309
5 K A -3.4830
6 G A -2.7312
7 G A -1.7826
1 F B 2.4803
2 G B 0.0295
3 G B -1.1444
4 H B -2.1620
5 K B -2.6741
6 G B -1.8287
7 G B -1.1877
1 F C 2.9295
2 G C 0.0000
3 G C -0.3309
4 H C -2.1201
5 K C -2.9137
6 G C -2.9093
7 G C -2.0538
1 F D 1.5752
2 G D -0.4434
3 G D -1.7826
4 H D -2.9696
5 K D -3.4064
6 G D -1.9498
7 G D -1.3082
1 F E 2.7799
2 G E 0.5251
3 G E -1.2872
4 H E -2.8783
5 K E -3.4143
6 G E -2.4068
7 G E -1.3356
1 F F 3.2533
2 G F 1.0998
3 G F -1.0290
4 H F -2.8727
5 K F -3.6008
6 G F -2.5408
7 G F -1.6017
1 F G 3.2074
2 G G 0.7423
3 G G -1.1413
4 H G -2.9237
5 K G -3.7324
6 G G -2.7296
7 G G -1.6440
1 F H 3.4274
2 G H 1.1978
3 G H -0.7955
4 H H -2.8220
5 K H -3.6025
6 G H -2.6652
7 G H -1.6963
1 F I 3.6775
2 G I 1.7817
3 G I -0.7626
4 H I -2.5552
5 K I -3.5976
6 G I -2.7011
7 G I -1.9118
1 F J 3.1083
2 G J 0.9931
3 G J -1.0615
4 H J -2.8014
5 K J -3.7560
6 G J -2.7856
7 G J -1.7972
1 F K 2.6936
2 G K 0.4037
3 G K -1.2127
4 H K -2.9790
5 K K -3.9034
6 G K -2.8736
7 G K -1.7278
1 F L 2.6827
2 G L 0.2032
3 G L -1.4528
4 H L -3.1818
5 K L -3.5397
6 G L -2.3858
7 G L -1.6708
1 F M 2.8381
2 G M 0.0000
3 G M -1.0695
4 H M -2.7529
5 K M -3.5910
6 G M -2.6892
7 G M -1.5515
1 F N 0.0000
2 G N -0.1920
3 G N -1.7422
4 H N -3.2895
5 K N -3.6199
6 G N -2.4470
7 G N -1.5491
1 F O 2.4096
2 G O 0.0703
3 G O -1.6561
4 H O -2.8793
5 K O -3.5324
6 G O -2.4607
7 G O -1.5628
1 F P 2.8033
2 G P 0.7473
3 G P -1.5104
4 H P -3.1037
5 K P -3.7347
6 G P -2.5483
7 G P -1.6710
1 F Q 3.2074
2 G Q 1.3591
3 G Q -1.2269
4 H Q -2.3326
5 K Q -3.3739
6 G Q -2.5331
7 G Q -1.5516
1 F R 3.2924
2 G R 0.0000
3 G R -0.9265
4 H R -2.8673
5 K R -3.5919
6 G R -2.7457
7 G R -1.8791
1 F S 3.2828
2 G S 1.2888
3 G S -0.7610
4 H S -2.5847
5 K S -3.4613
6 G S -2.7030
7 G S -1.5892
1 F T 1.9960
2 G T 0.0000
3 G T -1.1961
4 H T -3.0989
5 K T -3.2822
6 G T -2.3476
7 G T -1.3569
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Laboratory of Theory of Biopolymers 2018