Project name: 7bf95e295ef9814

Status: done

Started: 2026-02-11 11:13:30
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Chain sequence(s) A: GGKGHFG
C: GGKGHFG
B: GGKGHFG
E: GGKGHFG
D: GGKGHFG
G: GGKGHFG
F: GGKGHFG
I: GGKGHFG
H: GGKGHFG
K: GGKGHFG
J: GGKGHFG
L: GGKGHFG
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:11)
Show buried residues

Minimal score value
-3.5257
Maximal score value
0.0
Average score
-1.4871
Total score value
-124.9181

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.7573
2 G A -2.0987
3 K A -3.1240
4 G A -2.2508
5 H A -2.0039
6 F A -1.1223
7 G A -0.9720
1 G B -1.4159
2 G B -1.7010
3 K B -2.6571
4 G B 0.0000
5 H B -2.3330
6 F B 0.0000
7 G B -1.3774
1 G C -1.7559
2 G C -2.0073
3 K C -2.5894
4 G C 0.0000
5 H C -2.1577
6 F C 0.0000
7 G C -1.6521
1 G D -1.8969
2 G D -2.0891
3 K D -2.5900
4 G D 0.0000
5 H D -2.1108
6 F D 0.0000
7 G D -1.5894
1 G E -1.8656
2 G E 0.0000
3 K E -2.8856
4 G E 0.0000
5 H E -1.8767
6 F E 0.0000
7 G E -1.5760
1 G F -1.8766
2 G F -2.3167
3 K F -2.7573
4 G F 0.0000
5 H F -1.8917
6 F F 0.0000
7 G F -1.2281
1 G G -1.4331
2 G G -2.3762
3 K G -3.0056
4 G G -2.1839
5 H G -1.6644
6 F G -0.3818
7 G G -0.6923
1 G H -1.3051
2 G H -1.9825
3 K H -2.6037
4 G H -2.2742
5 H H -2.0655
6 F H -1.5086
7 G H -1.2437
1 G I -1.7966
2 G I -2.1532
3 K I -2.6556
4 G I 0.0000
5 H I -1.9705
6 F I 0.0000
7 G I -1.5209
1 G J -1.9036
2 G J 0.0000
3 K J -2.9306
4 G J 0.0000
5 H J -2.0189
6 F J 0.0000
7 G J -1.4988
1 G K -2.0095
2 G K -2.5034
3 K K -2.8757
4 G K 0.0000
5 H K -2.0283
6 F K 0.0000
7 G K -1.5315
1 G L -1.9927
2 G L 0.0000
3 K L -3.5257
4 G L 0.0000
5 H L -2.3274
6 F L 0.0000
7 G L -1.4283
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Laboratory of Theory of Biopolymers 2018