| Chain sequence(s) |
A: KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | LS84A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 3.80004 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:33)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:35)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:07)
[INFO] Main: Simulation completed successfully. (00:01:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.8507 | |
| 2 | V | A | -0.0615 | |
| 3 | F | A | 0.0000 | |
| 4 | E | A | -2.1397 | |
| 5 | R | A | -2.1298 | |
| 6 | C | A | -1.7866 | |
| 7 | E | A | -2.0638 | |
| 8 | L | A | 0.0000 | |
| 9 | A | A | 0.0000 | |
| 10 | R | A | -2.8341 | |
| 11 | T | A | 0.0000 | |
| 12 | L | A | 0.0000 | |
| 13 | K | A | -2.6947 | |
| 14 | R | A | -2.7548 | |
| 15 | L | A | -1.3922 | |
| 16 | G | A | -1.4420 | |
| 17 | M | A | 0.0000 | |
| 18 | D | A | -2.2864 | |
| 19 | G | A | -1.7900 | |
| 20 | Y | A | -1.7450 | |
| 21 | R | A | -2.7683 | |
| 22 | G | A | -1.6696 | |
| 23 | I | A | 0.0000 | |
| 24 | S | A | -1.3084 | |
| 25 | L | A | 0.0000 | |
| 26 | A | A | 0.0000 | |
| 27 | N | A | -1.2242 | |
| 28 | W | A | 0.0000 | |
| 29 | M | A | 0.0000 | |
| 30 | C | A | 0.0000 | |
| 31 | L | A | 0.0000 | |
| 32 | A | A | 0.0000 | |
| 33 | K | A | -1.2385 | |
| 34 | W | A | -0.6162 | |
| 35 | E | A | -0.5979 | |
| 36 | S | A | -0.7747 | |
| 37 | G | A | -0.7664 | |
| 38 | Y | A | 0.0000 | |
| 39 | N | A | -1.2453 | |
| 40 | T | A | 0.0000 | |
| 41 | R | A | -2.3058 | |
| 42 | A | A | -1.2273 | |
| 43 | T | A | -0.7551 | |
| 44 | N | A | -0.3802 | |
| 45 | Y | A | 0.0542 | |
| 46 | N | A | -1.1166 | |
| 47 | A | A | -1.1775 | |
| 48 | G | A | -1.6624 | |
| 49 | D | A | -2.6810 | |
| 50 | R | A | -2.9459 | |
| 51 | S | A | 0.0000 | |
| 52 | T | A | 0.0000 | |
| 53 | D | A | -0.4351 | |
| 54 | Y | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | I | A | 0.0000 | |
| 57 | F | A | 0.0000 | |
| 58 | Q | A | -0.6670 | |
| 59 | I | A | 0.0000 | |
| 60 | N | A | -0.1635 | |
| 61 | S | A | 0.0000 | |
| 62 | R | A | -0.2955 | |
| 63 | Y | A | 1.6205 | |
| 64 | W | A | 0.4910 | |
| 65 | C | A | 0.0000 | |
| 66 | N | A | -1.0515 | |
| 67 | D | A | -1.5647 | |
| 68 | G | A | -1.7547 | |
| 69 | K | A | -2.5224 | |
| 70 | T | A | 0.0000 | |
| 71 | P | A | -1.4199 | |
| 72 | G | A | -0.5678 | |
| 73 | A | A | 0.3008 | |
| 74 | V | A | 1.7178 | |
| 75 | N | A | 0.3510 | |
| 76 | A | A | 0.2886 | |
| 77 | C | A | -0.4009 | |
| 78 | H | A | -0.7938 | |
| 79 | L | A | -0.6670 | |
| 80 | S | A | -0.7886 | |
| 81 | C | A | 0.0000 | |
| 82 | S | A | -0.6259 | |
| 83 | A | A | -0.8106 | |
| 84 | S | A | 0.0000 | mutated: LS84A |
| 85 | L | A | -1.6626 | |
| 86 | Q | A | -2.4801 | |
| 87 | D | A | -3.1193 | |
| 88 | N | A | -2.5933 | |
| 89 | I | A | 0.0000 | |
| 90 | A | A | -0.8725 | |
| 91 | D | A | -0.9514 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | 0.0000 | |
| 94 | A | A | -0.5188 | |
| 95 | C | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | K | A | -1.7619 | |
| 98 | R | A | -2.0822 | |
| 99 | V | A | 0.0000 | |
| 100 | V | A | 0.0000 | |
| 101 | R | A | -3.2782 | |
| 102 | D | A | -2.7064 | |
| 103 | P | A | -1.5439 | |
| 104 | Q | A | -1.5129 | |
| 105 | G | A | -2.0526 | |
| 106 | I | A | 0.0000 | |
| 107 | R | A | -1.7169 | |
| 108 | A | A | -0.6426 | |
| 109 | W | A | 0.0000 | |
| 110 | V | A | 0.3410 | |
| 111 | A | A | -0.7405 | |
| 112 | W | A | -1.6095 | |
| 113 | R | A | -2.8788 | |
| 114 | N | A | -2.7648 | |
| 115 | R | A | -2.7577 | |
| 116 | C | A | 0.0000 | |
| 117 | Q | A | -3.2159 | |
| 118 | N | A | -3.3732 | |
| 119 | R | A | -4.2649 | |
| 120 | D | A | -3.7391 | |
| 121 | V | A | -3.0881 | |
| 122 | R | A | -3.4303 | |
| 123 | Q | A | -2.8317 | |
| 124 | Y | A | 0.0000 | |
| 125 | V | A | 0.0000 | |
| 126 | Q | A | -2.2603 | |
| 127 | G | A | -1.2421 | |
| 128 | C | A | 0.0000 | |
| 129 | G | A | -0.7150 | |
| 130 | V | A | -0.4688 |