Project name: query_structure

Status: done

Started: 2026-03-17 01:30:16
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDAYPGYPYVNYYRITYGETGGNSPVQEFTVPYYYSTATISGLKPGVDYTITVYASYSPWYSYSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:29)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:30)
Show buried residues

Minimal score value
-2.6479
Maximal score value
2.0946
Average score
-0.1777
Total score value
-16.5274

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.7036
2 S A 0.7729
3 S A 0.7194
4 V A 0.3127
5 P A 0.0000
6 T A -1.4333
7 K A -2.6479
8 L A 0.0000
9 E A -1.9353
10 V A 0.0936
11 V A 1.5318
12 A A 0.8986
13 A A 0.3083
14 T A -0.3400
15 P A -1.1296
16 T A -1.0006
17 S A -0.5321
18 L A 0.0000
19 L A 0.7624
20 I A 0.0000
21 S A -0.6427
22 W A 0.0000
23 D A -2.1671
24 A A -0.0499
25 Y A 0.4676
26 P A 0.1152
27 G A 0.3279
28 Y A 1.2586
29 P A 0.6967
30 Y A 1.4898
31 V A 1.2705
32 N A -0.1708
33 Y A 0.5149
34 Y A 0.0000
35 R A -0.7181
36 I A 0.0000
37 T A -0.5350
38 Y A -0.3030
39 G A 0.0000
40 E A -1.5904
41 T A -1.2845
42 G A -1.2625
43 G A -1.4378
44 N A -1.5592
45 S A -0.8622
46 P A -0.3253
47 V A 0.4392
48 Q A -0.8263
49 E A -1.6208
50 F A -0.6710
51 T A -0.1062
52 V A 0.0000
53 P A 0.7287
54 Y A 1.6153
55 Y A 2.0946
56 Y A 1.9190
57 S A 0.6313
58 T A 0.3190
59 A A 0.0000
60 T A 0.2982
61 I A 0.0000
62 S A -0.6567
63 G A -1.0339
64 L A 0.0000
65 K A -2.3834
66 P A -1.6707
67 G A -1.4626
68 V A -1.4383
69 D A -2.1479
70 Y A 0.0000
71 T A -0.7956
72 I A 0.0000
73 T A -0.1857
74 V A 0.0000
75 Y A 0.2716
76 A A 0.0000
77 S A 0.0000
78 Y A 1.3750
79 S A 0.0000
80 P A 0.6228
81 W A 1.7632
82 Y A 1.9854
83 S A 0.9771
84 Y A 0.5721
85 S A 0.0533
86 P A -0.0673
87 I A 0.0396
88 S A -0.5412
89 I A -0.6991
90 N A -1.7222
91 Y A -1.4619
92 R A -2.5420
93 T A -1.5172
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Laboratory of Theory of Biopolymers 2018