| Chain sequence(s) |
A: CGEWTYDDATKTFTVTE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:09)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:09)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:09)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:09)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:09)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:18)
[INFO] Main: Simulation completed successfully. (00:00:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | -0.0672 | |
| 2 | G | A | -1.0307 | |
| 3 | E | A | -1.3289 | |
| 4 | W | A | 0.7706 | |
| 5 | T | A | 0.5190 | |
| 6 | Y | A | 0.0710 | |
| 7 | D | A | -1.8137 | |
| 8 | D | A | -2.6683 | |
| 9 | A | A | -1.6924 | |
| 10 | T | A | -1.4777 | |
| 11 | K | A | -2.3145 | |
| 12 | T | A | -0.5382 | |
| 13 | F | A | 1.6195 | |
| 14 | T | A | 0.8733 | |
| 15 | V | A | 0.8699 | |
| 16 | T | A | -0.5877 | |
| 17 | E | A | -1.8039 |