Project name: query_structure

Status: done

Started: 2026-03-17 01:23:41
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDAPAVTVDYYLITYGETGWAWGGQEFEVPGSKSTATISGLKPGVDYTITVYAISPEWWYYSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:44)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:45)
Show buried residues

Minimal score value
-2.5898
Maximal score value
2.5542
Average score
-0.3936
Total score value
-35.8204

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.8293
2 S A 0.8763
3 S A 1.2445
4 V A 0.8601
5 P A 0.0000
6 T A -1.2216
7 K A -2.3017
8 L A 0.0000
9 E A -1.8173
10 V A 0.0664
11 V A 1.5152
12 A A 0.8774
13 A A 0.2949
14 T A -0.3492
15 P A -1.1270
16 T A -0.9972
17 S A -0.5397
18 L A 0.0000
19 L A 0.7113
20 I A 0.0000
21 S A -0.7696
22 W A 0.0000
23 D A -1.6203
24 A A -0.7264
25 P A 0.3372
26 A A 0.6421
27 V A 0.7415
28 T A -0.4595
29 V A -0.7016
30 D A -1.7977
31 Y A -1.3965
32 Y A 0.0000
33 L A -0.5466
34 I A 0.0000
35 T A -1.3162
36 Y A -1.0071
37 G A -0.7693
38 E A -0.8563
39 T A -0.6864
40 G A 0.0237
41 W A 1.0571
42 A A 0.8414
43 W A 1.0775
44 G A -0.1986
45 G A -0.9409
46 Q A -2.1108
47 E A -2.5898
48 F A -1.4942
49 E A -1.8780
50 V A 0.0000
51 P A -1.5250
52 G A -1.5416
53 S A -1.3866
54 K A -1.9615
55 S A -1.1833
56 T A -0.6427
57 A A 0.0000
58 T A 0.2272
59 I A 0.0000
60 S A -0.6609
61 G A -1.1503
62 L A 0.0000
63 K A -2.3328
64 P A -1.6492
65 G A -1.4427
66 V A -1.3606
67 D A -2.0160
68 Y A 0.0000
69 T A -0.7935
70 I A 0.0000
71 T A -0.2959
72 V A 0.0000
73 Y A 0.7435
74 A A 0.0000
75 I A 0.0000
76 S A 0.0051
77 P A -0.8323
78 E A -0.9646
79 W A 1.1612
80 W A 2.0142
81 Y A 2.5542
82 Y A 2.4924
83 S A 1.2842
84 P A 0.7042
85 I A 0.2867
86 S A -0.3393
87 I A -0.7283
88 N A -1.7366
89 Y A -1.4725
90 R A -2.5285
91 T A -1.5250
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Laboratory of Theory of Biopolymers 2018