| Chain sequence(s) |
A: GEPPPGKPADDAGLVSRHWKRGFILKRGEPPPGKPADDAGLVSRHWKRGFILKRGEPPPGKPADDAGLVSRHWKRGFILKRGEPPPGKPADDAGLVSRHWKRGFILKRGEPPPGKPADDAGLV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:05)
[INFO] Main: Simulation completed successfully. (00:02:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.4619 | |
| 2 | E | A | -2.2744 | |
| 3 | P | A | -1.5362 | |
| 4 | P | A | -1.4596 | |
| 5 | P | A | -1.4250 | |
| 6 | G | A | -1.5942 | |
| 7 | K | A | -2.4315 | |
| 8 | P | A | -2.3490 | |
| 9 | A | A | -2.3183 | |
| 10 | D | A | -3.1077 | |
| 11 | D | A | -2.4746 | |
| 12 | A | A | -1.0745 | |
| 13 | G | A | -0.0599 | |
| 14 | L | A | 1.1825 | |
| 15 | V | A | 1.7619 | |
| 16 | S | A | 0.0738 | |
| 17 | R | A | -1.8476 | |
| 18 | H | A | -1.9620 | |
| 19 | W | A | -1.0763 | |
| 20 | K | A | -2.7510 | |
| 21 | R | A | -3.0580 | |
| 22 | G | A | -1.0519 | |
| 23 | F | A | 1.5033 | |
| 24 | I | A | 0.0000 | |
| 25 | L | A | 0.5698 | |
| 26 | K | A | 0.0000 | |
| 27 | R | A | -2.7253 | |
| 28 | G | A | -2.7061 | |
| 29 | E | A | -2.9200 | |
| 30 | P | A | -2.2513 | |
| 31 | P | A | -1.1342 | |
| 32 | P | A | -1.2493 | |
| 33 | G | A | -1.2295 | |
| 34 | K | A | -1.5720 | |
| 35 | P | A | -1.8345 | |
| 36 | A | A | 0.0000 | |
| 37 | D | A | -3.1987 | |
| 38 | D | A | 0.0000 | |
| 39 | A | A | -1.4295 | |
| 40 | G | A | -0.1052 | |
| 41 | L | A | 0.0000 | |
| 42 | V | A | 1.3204 | |
| 43 | S | A | 0.0000 | |
| 44 | R | A | -1.6279 | |
| 45 | H | A | 0.0000 | |
| 46 | W | A | -1.5851 | |
| 47 | K | A | -3.3692 | |
| 48 | R | A | -3.4489 | |
| 49 | G | A | 0.0000 | |
| 50 | F | A | 1.1284 | |
| 51 | I | A | 0.0000 | |
| 52 | L | A | 0.4340 | |
| 53 | K | A | 0.0000 | |
| 54 | R | A | -2.6541 | |
| 55 | G | A | -2.8449 | |
| 56 | E | A | -3.1520 | |
| 57 | P | A | -2.5201 | |
| 58 | P | A | -1.5497 | |
| 59 | P | A | -1.2238 | |
| 60 | G | A | -1.4452 | |
| 61 | K | A | -1.8389 | |
| 62 | P | A | -2.0805 | |
| 63 | A | A | 0.0000 | |
| 64 | D | A | -3.2278 | |
| 65 | D | A | -2.3724 | |
| 66 | A | A | -1.3845 | |
| 67 | G | A | -0.4788 | |
| 68 | L | A | 0.0000 | |
| 69 | V | A | 0.6799 | |
| 70 | S | A | 0.0000 | |
| 71 | R | A | -1.4068 | |
| 72 | H | A | 0.0000 | |
| 73 | W | A | -1.6106 | |
| 74 | K | A | -3.5215 | |
| 75 | R | A | -2.8068 | |
| 76 | G | A | 0.0000 | |
| 77 | F | A | 0.9453 | |
| 78 | I | A | 0.0000 | |
| 79 | L | A | 0.0680 | |
| 80 | K | A | 0.0000 | |
| 81 | R | A | -3.5133 | |
| 82 | G | A | -3.3831 | |
| 83 | E | A | -3.7075 | |
| 84 | P | A | -2.6540 | |
| 85 | P | A | 0.0000 | |
| 86 | P | A | -1.3273 | |
| 87 | G | A | -1.5218 | |
| 88 | K | A | -1.7454 | |
| 89 | P | A | -1.8941 | |
| 90 | A | A | -2.3246 | |
| 91 | D | A | -2.9443 | |
| 92 | D | A | -2.4082 | |
| 93 | A | A | -1.3042 | |
| 94 | G | A | -0.1403 | |
| 95 | L | A | 0.0000 | |
| 96 | V | A | 1.1288 | |
| 97 | S | A | 0.0000 | |
| 98 | R | A | -1.6570 | |
| 99 | H | A | -1.8883 | |
| 100 | W | A | -1.4379 | |
| 101 | K | A | -3.3961 | |
| 102 | R | A | -2.7455 | |
| 103 | G | A | -1.4495 | |
| 104 | F | A | 1.2043 | |
| 105 | I | A | 1.4741 | |
| 106 | L | A | 0.3893 | |
| 107 | K | A | -1.6676 | |
| 108 | R | A | -3.4164 | |
| 109 | G | A | -3.4789 | |
| 110 | E | A | -3.5827 | |
| 111 | P | A | -2.6921 | |
| 112 | P | A | -2.0098 | |
| 113 | P | A | -1.3962 | |
| 114 | G | A | -1.5589 | |
| 115 | K | A | -2.6753 | |
| 116 | P | A | -2.1908 | |
| 117 | A | A | -2.6046 | |
| 118 | D | A | -3.1098 | |
| 119 | D | A | -2.5813 | |
| 120 | A | A | -1.3013 | |
| 121 | G | A | 0.2005 | |
| 122 | L | A | 2.1614 | |
| 123 | V | A | 2.2390 |