Project name: query_structure

Status: done

Started: 2026-03-16 22:53:06
Settings
Chain sequence(s) A: ADGFCGESCYVIPCISYLVGCSCDTIEKVCKRNG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:20)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:20)
Show buried residues

Minimal score value
-2.9651
Maximal score value
3.3013
Average score
0.3871
Total score value
13.1624

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -1.3442
2 D A -2.6822
3 G A -1.1421
4 F A 0.5548
5 C A 0.5644
6 G A 0.1818
7 E A 0.4116
8 S A 0.6154
9 C A 1.3355
10 Y A 2.0951
11 V A 2.8959
12 I A 2.6971
13 P A 1.8272
14 C A 0.0000
15 I A 3.0268
16 S A 2.2897
17 Y A 2.8897
18 L A 3.3013
19 V A 2.7652
20 G A 0.7626
21 C A 0.0000
22 S A -0.0148
23 C A 0.3694
24 D A -0.6380
25 T A 0.2146
26 I A 0.8378
27 E A -1.0823
28 K A -0.4427
29 V A -0.2573
30 C A 0.0000
31 K A -1.5750
32 R A -2.2478
33 N A -2.9651
34 G A -2.0820
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Laboratory of Theory of Biopolymers 2018