| Chain sequence(s) |
A: ADGFCGESCYVIPCISYLVGCSCDTIEKVCKRNG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:20)
[INFO] Main: Simulation completed successfully. (00:00:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -1.3442 | |
| 2 | D | A | -2.6822 | |
| 3 | G | A | -1.1421 | |
| 4 | F | A | 0.5548 | |
| 5 | C | A | 0.5644 | |
| 6 | G | A | 0.1818 | |
| 7 | E | A | 0.4116 | |
| 8 | S | A | 0.6154 | |
| 9 | C | A | 1.3355 | |
| 10 | Y | A | 2.0951 | |
| 11 | V | A | 2.8959 | |
| 12 | I | A | 2.6971 | |
| 13 | P | A | 1.8272 | |
| 14 | C | A | 0.0000 | |
| 15 | I | A | 3.0268 | |
| 16 | S | A | 2.2897 | |
| 17 | Y | A | 2.8897 | |
| 18 | L | A | 3.3013 | |
| 19 | V | A | 2.7652 | |
| 20 | G | A | 0.7626 | |
| 21 | C | A | 0.0000 | |
| 22 | S | A | -0.0148 | |
| 23 | C | A | 0.3694 | |
| 24 | D | A | -0.6380 | |
| 25 | T | A | 0.2146 | |
| 26 | I | A | 0.8378 | |
| 27 | E | A | -1.0823 | |
| 28 | K | A | -0.4427 | |
| 29 | V | A | -0.2573 | |
| 30 | C | A | 0.0000 | |
| 31 | K | A | -1.5750 | |
| 32 | R | A | -2.2478 | |
| 33 | N | A | -2.9651 | |
| 34 | G | A | -2.0820 |