| Chain sequence(s) |
H: QVQLVESGGGLVQPGGSLRLSCAASGLSGRPFSDYSLGWFRQAPGQGLEAVAAINGQGGETYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAARYSRDLQLPAPENYQYWGQGTLVTVS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:08)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:08)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:08)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:08)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:08)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:56)
[INFO] Main: Simulation completed successfully. (00:01:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.6367 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.1909 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.8759 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.2576 | |
| 8 | G | H | -0.6129 | |
| 9 | G | H | 0.1471 | |
| 10 | G | H | 0.7003 | |
| 11 | L | H | 1.4087 | |
| 12 | V | H | -0.0405 | |
| 13 | Q | H | -1.4124 | |
| 14 | P | H | -1.8682 | |
| 15 | G | H | -1.6831 | |
| 16 | G | H | -1.1884 | |
| 17 | S | H | -1.4212 | |
| 18 | L | H | -1.0440 | |
| 19 | R | H | -2.3229 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.4934 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.2023 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.8762 | |
| 26 | G | H | -1.4973 | |
| 27 | L | H | 0.0000 | |
| 28 | S | H | -1.1928 | |
| 29 | G | H | -1.2161 | |
| 30 | R | H | -1.3902 | |
| 31 | P | H | -1.0430 | |
| 32 | F | H | 0.0000 | |
| 33 | S | H | -1.2658 | |
| 34 | D | H | 0.0000 | |
| 35 | Y | H | 0.0000 | |
| 36 | S | H | 0.0000 | |
| 37 | L | H | 0.0000 | |
| 38 | G | H | 0.0000 | |
| 39 | W | H | 0.0000 | |
| 40 | F | H | 0.0000 | |
| 41 | R | H | -0.6346 | |
| 42 | Q | H | -1.0216 | |
| 43 | A | H | -1.1649 | |
| 44 | P | H | -0.9383 | |
| 45 | G | H | -1.3121 | |
| 46 | Q | H | -1.9833 | |
| 47 | G | H | -1.4796 | |
| 48 | L | H | -0.9484 | |
| 49 | E | H | -1.7184 | |
| 50 | A | H | -0.4598 | |
| 51 | V | H | 0.0000 | |
| 52 | A | H | 0.0000 | |
| 53 | A | H | 0.0000 | |
| 54 | I | H | 0.0000 | |
| 55 | N | H | 0.0000 | |
| 56 | G | H | 0.0000 | |
| 57 | Q | H | -2.5519 | |
| 58 | G | H | -2.1680 | |
| 59 | G | H | -2.0365 | |
| 60 | E | H | -2.4785 | |
| 61 | T | H | -0.7302 | |
| 62 | Y | H | 0.2563 | |
| 63 | Y | H | -0.5080 | |
| 64 | A | H | -1.4083 | |
| 65 | D | H | -2.4267 | |
| 66 | S | H | -1.8780 | |
| 67 | V | H | 0.0000 | |
| 68 | K | H | -2.5491 | |
| 69 | G | H | -1.9091 | |
| 70 | R | H | -1.8875 | |
| 71 | F | H | 0.0000 | |
| 72 | T | H | -1.0226 | |
| 73 | I | H | 0.0000 | |
| 74 | S | H | -0.8551 | |
| 75 | R | H | 0.0000 | |
| 76 | D | H | -1.8502 | |
| 77 | N | H | -1.9042 | |
| 78 | S | H | -1.6493 | |
| 79 | K | H | -2.3588 | |
| 80 | N | H | -1.7069 | |
| 81 | T | H | -1.0102 | |
| 82 | L | H | 0.0000 | |
| 83 | Y | H | 0.0000 | |
| 84 | L | H | 0.0000 | |
| 85 | Q | H | -1.7378 | |
| 86 | M | H | 0.0000 | |
| 87 | N | H | -2.2071 | |
| 88 | S | H | -1.7040 | |
| 89 | L | H | 0.0000 | |
| 90 | R | H | -3.0112 | |
| 91 | A | H | -2.0429 | |
| 92 | E | H | -2.4668 | |
| 93 | D | H | 0.0000 | |
| 94 | T | H | -0.5447 | |
| 95 | A | H | 0.0000 | |
| 96 | V | H | 0.7288 | |
| 97 | Y | H | 0.0000 | |
| 98 | Y | H | 0.2025 | |
| 99 | C | H | 0.0000 | |
| 100 | A | H | 0.0000 | |
| 101 | A | H | 0.0000 | |
| 102 | R | H | -1.1852 | |
| 103 | Y | H | -0.1520 | |
| 104 | S | H | -1.3003 | |
| 105 | R | H | -3.0308 | |
| 106 | D | H | -3.2165 | |
| 107 | L | H | -1.9406 | |
| 108 | Q | H | -1.2558 | |
| 109 | L | H | 0.5609 | |
| 110 | P | H | 0.0726 | |
| 111 | A | H | -0.6681 | |
| 112 | P | H | -1.1805 | |
| 113 | E | H | -2.1101 | |
| 114 | N | H | -1.5508 | |
| 115 | Y | H | 0.0000 | |
| 116 | Q | H | -1.4492 | |
| 117 | Y | H | -0.5926 | |
| 118 | W | H | -0.1075 | |
| 119 | G | H | -0.1162 | |
| 120 | Q | H | -0.8347 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.5760 | |
| 123 | L | H | 1.6132 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.2804 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8834 |