| Chain sequence(s) |
L: KDELEKQVPVFVAD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 90 | K | L | -1.9081 | |
| 91 | D | L | -2.4313 | |
| 92 | E | L | -1.9390 | |
| 93 | L | L | 0.4951 | |
| 94 | E | L | -0.8494 | |
| 95 | K | L | -2.0812 | |
| 96 | Q | L | -1.2233 | |
| 97 | V | L | 1.2023 | |
| 98 | P | L | 0.0473 | |
| 99 | V | L | 1.0178 | |
| 100 | F | L | 2.3927 | |
| 101 | V | L | 2.1367 | |
| 102 | A | L | 0.0453 | |
| 103 | D | L | -1.7784 |