| Chain sequence(s) |
A: GSSVSSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYSYYDIYYAVSPSSINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:30)
[INFO] Main: Simulation completed successfully. (00:00:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.4208 | |
| 2 | S | A | -0.0846 | |
| 3 | S | A | 0.3466 | |
| 4 | V | A | 1.4800 | |
| 5 | S | A | 0.5460 | |
| 6 | S | A | 0.2354 | |
| 7 | V | A | -0.1402 | |
| 8 | P | A | 0.0000 | |
| 9 | T | A | -1.4400 | |
| 10 | K | A | -2.6455 | |
| 11 | L | A | 0.0000 | |
| 12 | E | A | -1.6933 | |
| 13 | V | A | 0.2287 | |
| 14 | V | A | 1.6034 | |
| 15 | A | A | 0.9272 | |
| 16 | A | A | 0.2967 | |
| 17 | T | A | -0.3856 | |
| 18 | P | A | -0.8125 | |
| 19 | T | A | -0.5319 | |
| 20 | S | A | -0.3150 | |
| 21 | L | A | 0.0000 | |
| 22 | L | A | 0.7786 | |
| 23 | I | A | 0.0000 | |
| 24 | S | A | -0.7013 | |
| 25 | W | A | 0.0000 | |
| 26 | D | A | -2.5249 | |
| 27 | A | A | -1.2330 | |
| 28 | S | A | -0.8459 | |
| 29 | S | A | -0.5739 | |
| 30 | S | A | -0.3959 | |
| 31 | S | A | -0.2167 | |
| 32 | V | A | 0.0000 | |
| 33 | S | A | 0.2790 | |
| 34 | Y | A | 0.2390 | |
| 35 | Y | A | 0.0000 | |
| 36 | R | A | -0.4721 | |
| 37 | I | A | 0.0000 | |
| 38 | T | A | 0.0000 | |
| 39 | Y | A | -0.3035 | |
| 40 | G | A | 0.0000 | |
| 41 | E | A | -1.2652 | |
| 42 | T | A | -1.1780 | |
| 43 | G | A | -1.2050 | |
| 44 | G | A | -1.3185 | |
| 45 | N | A | -1.5224 | |
| 46 | S | A | -0.8236 | |
| 47 | P | A | -0.2996 | |
| 48 | V | A | 0.4817 | |
| 49 | Q | A | -0.7813 | |
| 50 | E | A | -1.5983 | |
| 51 | F | A | -0.5971 | |
| 52 | T | A | -0.1998 | |
| 53 | V | A | 0.0646 | |
| 54 | P | A | -0.2222 | |
| 55 | G | A | -0.2319 | |
| 56 | S | A | -0.3424 | |
| 57 | S | A | -0.3955 | |
| 58 | S | A | -0.6085 | |
| 59 | T | A | -0.2223 | |
| 60 | A | A | 0.0000 | |
| 61 | T | A | 0.2555 | |
| 62 | I | A | 0.0000 | |
| 63 | S | A | -0.4727 | |
| 64 | G | A | -0.6871 | |
| 65 | L | A | 0.0000 | |
| 66 | S | A | -0.8302 | |
| 67 | P | A | -0.9854 | |
| 68 | G | A | -1.0613 | |
| 69 | V | A | -0.8898 | |
| 70 | D | A | -1.7638 | |
| 71 | Y | A | 0.0000 | |
| 72 | T | A | -0.7513 | |
| 73 | I | A | 0.0000 | |
| 74 | T | A | -0.4640 | |
| 75 | V | A | 0.0000 | |
| 76 | Y | A | 0.2263 | |
| 77 | A | A | 0.0000 | |
| 78 | Y | A | 1.1200 | |
| 79 | Y | A | 0.0000 | |
| 80 | S | A | 1.3196 | |
| 81 | Y | A | 1.7504 | |
| 82 | Y | A | 1.5131 | |
| 83 | D | A | 0.2649 | |
| 84 | I | A | 2.4135 | |
| 85 | Y | A | 2.6343 | |
| 86 | Y | A | 2.0518 | |
| 87 | A | A | 1.1885 | |
| 88 | V | A | 0.6190 | |
| 89 | S | A | 0.0233 | |
| 90 | P | A | -0.1470 | |
| 91 | S | A | -0.4826 | |
| 92 | S | A | -0.6718 | |
| 93 | I | A | -0.7618 | |
| 94 | N | A | -1.6643 | |
| 95 | Y | A | -1.3609 | |
| 96 | R | A | -2.2871 | |
| 97 | T | A | -1.1646 |