Project name: query_structure

Status: done

Started: 2026-03-16 23:37:47
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Chain sequence(s) A: GSSVSSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYSYYDIYYAVSPSSINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:30)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:31)
Show buried residues

Minimal score value
-2.6455
Maximal score value
2.6343
Average score
-0.2279
Total score value
-22.1068

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.4208
2 S A -0.0846
3 S A 0.3466
4 V A 1.4800
5 S A 0.5460
6 S A 0.2354
7 V A -0.1402
8 P A 0.0000
9 T A -1.4400
10 K A -2.6455
11 L A 0.0000
12 E A -1.6933
13 V A 0.2287
14 V A 1.6034
15 A A 0.9272
16 A A 0.2967
17 T A -0.3856
18 P A -0.8125
19 T A -0.5319
20 S A -0.3150
21 L A 0.0000
22 L A 0.7786
23 I A 0.0000
24 S A -0.7013
25 W A 0.0000
26 D A -2.5249
27 A A -1.2330
28 S A -0.8459
29 S A -0.5739
30 S A -0.3959
31 S A -0.2167
32 V A 0.0000
33 S A 0.2790
34 Y A 0.2390
35 Y A 0.0000
36 R A -0.4721
37 I A 0.0000
38 T A 0.0000
39 Y A -0.3035
40 G A 0.0000
41 E A -1.2652
42 T A -1.1780
43 G A -1.2050
44 G A -1.3185
45 N A -1.5224
46 S A -0.8236
47 P A -0.2996
48 V A 0.4817
49 Q A -0.7813
50 E A -1.5983
51 F A -0.5971
52 T A -0.1998
53 V A 0.0646
54 P A -0.2222
55 G A -0.2319
56 S A -0.3424
57 S A -0.3955
58 S A -0.6085
59 T A -0.2223
60 A A 0.0000
61 T A 0.2555
62 I A 0.0000
63 S A -0.4727
64 G A -0.6871
65 L A 0.0000
66 S A -0.8302
67 P A -0.9854
68 G A -1.0613
69 V A -0.8898
70 D A -1.7638
71 Y A 0.0000
72 T A -0.7513
73 I A 0.0000
74 T A -0.4640
75 V A 0.0000
76 Y A 0.2263
77 A A 0.0000
78 Y A 1.1200
79 Y A 0.0000
80 S A 1.3196
81 Y A 1.7504
82 Y A 1.5131
83 D A 0.2649
84 I A 2.4135
85 Y A 2.6343
86 Y A 2.0518
87 A A 1.1885
88 V A 0.6190
89 S A 0.0233
90 P A -0.1470
91 S A -0.4826
92 S A -0.6718
93 I A -0.7618
94 N A -1.6643
95 Y A -1.3609
96 R A -2.2871
97 T A -1.1646
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Laboratory of Theory of Biopolymers 2018