| Chain sequence(s) |
A: GSEEESDKDIWELVQAYMDDMAAIDWETITLEEFEALKKEWLERFDKLIEEFKKRGDERGVKDANWWKNFFEGNFEIQAEEIREREK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:30)
[INFO] Main: Simulation completed successfully. (00:05:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -2.3854 | |
| 2 | S | A | -3.2170 | |
| 3 | E | A | -4.9218 | |
| 4 | E | A | -5.0564 | |
| 5 | E | A | -4.9468 | |
| 6 | S | A | 0.0000 | |
| 7 | D | A | -5.3452 | |
| 8 | K | A | -4.8796 | |
| 9 | D | A | -4.2020 | |
| 10 | I | A | 0.0000 | |
| 11 | W | A | -2.1414 | |
| 12 | E | A | -2.9222 | |
| 13 | L | A | 0.0000 | |
| 14 | V | A | 0.0000 | |
| 15 | Q | A | -1.6272 | |
| 16 | A | A | -1.4078 | |
| 17 | Y | A | 0.0000 | |
| 18 | M | A | -0.9449 | |
| 19 | D | A | -2.0068 | |
| 20 | D | A | -1.4079 | |
| 21 | M | A | -0.7775 | |
| 22 | A | A | -0.7399 | |
| 23 | A | A | -0.8164 | |
| 24 | I | A | -1.0691 | |
| 25 | D | A | -1.9623 | |
| 26 | W | A | -1.4998 | |
| 27 | E | A | -2.3927 | |
| 28 | T | A | -1.4388 | |
| 29 | I | A | -1.2849 | |
| 30 | T | A | -2.2404 | |
| 31 | L | A | -2.8613 | |
| 32 | E | A | -3.1139 | |
| 33 | E | A | -3.2225 | |
| 34 | F | A | 0.0000 | |
| 35 | E | A | -3.7113 | |
| 36 | A | A | -2.8769 | |
| 37 | L | A | -2.4893 | |
| 38 | K | A | -3.2865 | |
| 39 | K | A | -3.7482 | |
| 40 | E | A | -3.5806 | |
| 41 | W | A | 0.0000 | |
| 42 | L | A | -2.7853 | |
| 43 | E | A | -3.5319 | |
| 44 | R | A | -3.2256 | |
| 45 | F | A | 0.0000 | |
| 46 | D | A | -3.5891 | |
| 47 | K | A | -3.9133 | |
| 48 | L | A | -3.1123 | |
| 49 | I | A | 0.0000 | |
| 50 | E | A | -4.6681 | |
| 51 | E | A | -4.2414 | |
| 52 | F | A | 0.0000 | |
| 53 | K | A | -5.2437 | |
| 54 | K | A | -4.6387 | |
| 55 | R | A | -4.3118 | |
| 56 | G | A | -3.6939 | |
| 57 | D | A | -4.1697 | |
| 58 | E | A | -4.5513 | |
| 59 | R | A | -4.5655 | |
| 60 | G | A | 0.0000 | |
| 61 | V | A | -3.6123 | |
| 62 | K | A | -3.5280 | |
| 63 | D | A | -3.0421 | |
| 64 | A | A | 0.0000 | |
| 65 | N | A | -1.4944 | |
| 66 | W | A | -0.1606 | |
| 67 | W | A | -0.1184 | |
| 68 | K | A | -1.2333 | |
| 69 | N | A | -0.8484 | |
| 70 | F | A | 0.4567 | |
| 71 | F | A | 0.0000 | |
| 72 | E | A | -1.4607 | |
| 73 | G | A | -0.8385 | |
| 74 | N | A | -0.5392 | |
| 75 | F | A | 0.0000 | |
| 76 | E | A | -2.2542 | |
| 77 | I | A | -0.2906 | |
| 78 | Q | A | -1.6178 | |
| 79 | A | A | -2.9356 | |
| 80 | E | A | -3.9269 | |
| 81 | E | A | -4.0131 | |
| 82 | I | A | 0.0000 | |
| 83 | R | A | -5.0394 | |
| 84 | E | A | -5.1192 | |
| 85 | R | A | -4.2552 | |
| 86 | E | A | -4.6227 | |
| 87 | K | A | -3.7025 |