| Chain sequence(s) |
A: DTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLENGGGGKYVCSNKLVLATGLRNKPLKETQGLFGAIAGFTEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAMDGVTNKVNSIIDKMNTQYEAIGCEYNNSERCMKQIEDKIEEIESKVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQYSEEARLKREEISGVKLESVGTYQRRKR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:48)
[INFO] Main: Simulation completed successfully. (00:07:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.5300 | |
| 2 | T | A | -1.4726 | |
| 3 | I | A | 0.0000 | |
| 4 | C | A | -0.2143 | |
| 5 | I | A | 0.0000 | |
| 6 | G | A | 0.0000 | |
| 7 | Y | A | -0.3334 | |
| 8 | H | A | 0.0000 | |
| 9 | A | A | 0.0000 | |
| 10 | N | A | -1.3466 | |
| 11 | N | A | -1.9456 | |
| 12 | S | A | -1.2790 | |
| 13 | T | A | -1.2687 | |
| 14 | D | A | -1.7429 | |
| 15 | T | A | -1.6448 | |
| 16 | V | A | 0.0000 | |
| 17 | D | A | -1.5246 | |
| 18 | T | A | 0.0000 | |
| 19 | V | A | 0.9616 | |
| 20 | L | A | 0.9298 | |
| 21 | E | A | -1.5738 | |
| 22 | K | A | -2.5668 | |
| 23 | N | A | -2.7007 | |
| 24 | V | A | 0.0000 | |
| 25 | T | A | -1.8079 | |
| 26 | V | A | 0.0000 | |
| 27 | T | A | 0.0000 | |
| 28 | H | A | -0.7920 | |
| 29 | S | A | -0.4242 | |
| 30 | V | A | -0.4762 | |
| 31 | N | A | -1.1481 | |
| 32 | L | A | 0.0000 | |
| 33 | L | A | -1.7095 | |
| 34 | E | A | -2.5659 | |
| 35 | N | A | -2.3370 | |
| 36 | G | A | -1.7674 | |
| 37 | G | A | 0.0000 | |
| 38 | G | A | -1.6464 | |
| 39 | G | A | -1.2537 | |
| 40 | K | A | -1.6475 | |
| 41 | Y | A | -1.0103 | |
| 42 | V | A | -0.3069 | |
| 43 | C | A | -0.0875 | |
| 44 | S | A | -0.6786 | |
| 45 | N | A | -1.5988 | |
| 46 | K | A | -1.7690 | |
| 47 | L | A | 0.0000 | |
| 48 | V | A | -0.7345 | |
| 49 | L | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | T | A | -0.1697 | |
| 52 | G | A | 0.0000 | |
| 53 | L | A | 0.0000 | |
| 54 | R | A | -1.8723 | |
| 55 | N | A | -1.8013 | |
| 56 | K | A | -2.1666 | |
| 57 | P | A | -1.8012 | |
| 58 | L | A | -1.6323 | |
| 59 | K | A | -3.0115 | |
| 60 | E | A | -3.0391 | |
| 61 | T | A | -2.2891 | |
| 62 | Q | A | -1.8808 | |
| 63 | G | A | -0.5085 | |
| 64 | L | A | 1.6804 | |
| 65 | F | A | 2.3619 | |
| 66 | G | A | 0.8810 | |
| 67 | A | A | 1.8316 | |
| 68 | I | A | 2.4922 | |
| 69 | A | A | 0.7427 | |
| 70 | G | A | -0.1513 | |
| 71 | F | A | 0.2091 | |
| 72 | T | A | -0.8356 | |
| 73 | E | A | -2.2781 | |
| 74 | G | A | 0.0000 | |
| 75 | G | A | 0.0000 | |
| 76 | W | A | 0.0000 | |
| 77 | Q | A | -1.3585 | |
| 78 | G | A | -0.6733 | |
| 79 | M | A | 0.0000 | |
| 80 | V | A | 0.6053 | |
| 81 | D | A | -1.0903 | |
| 82 | G | A | 0.0000 | |
| 83 | W | A | 0.0000 | |
| 84 | Y | A | 0.0000 | |
| 85 | G | A | 0.0000 | |
| 86 | Y | A | 0.0000 | |
| 87 | H | A | -0.0602 | |
| 88 | H | A | -0.8131 | |
| 89 | S | A | -1.7060 | |
| 90 | N | A | -2.8118 | |
| 91 | E | A | -3.3948 | |
| 92 | Q | A | -2.9407 | |
| 93 | G | A | -2.1509 | |
| 94 | S | A | -1.2517 | |
| 95 | G | A | -0.1748 | |
| 96 | Y | A | 0.4553 | |
| 97 | A | A | -0.2962 | |
| 98 | A | A | 0.0000 | |
| 99 | D | A | 0.0000 | |
| 100 | K | A | -2.9513 | |
| 101 | E | A | -3.2106 | |
| 102 | S | A | -2.3495 | |
| 103 | T | A | 0.0000 | |
| 104 | Q | A | -3.2393 | |
| 105 | K | A | -3.3625 | |
| 106 | A | A | 0.0000 | |
| 107 | M | A | -1.7692 | |
| 108 | D | A | -2.5944 | |
| 109 | G | A | -1.9943 | |
| 110 | V | A | 0.0000 | |
| 111 | T | A | -1.6911 | |
| 112 | N | A | -2.2605 | |
| 113 | K | A | -1.6794 | |
| 114 | V | A | -1.3247 | |
| 115 | N | A | -2.3153 | |
| 116 | S | A | -2.0486 | |
| 117 | I | A | 0.0000 | |
| 118 | I | A | -1.8137 | |
| 119 | D | A | -3.0348 | |
| 120 | K | A | -2.8964 | |
| 121 | M | A | -2.0213 | |
| 122 | N | A | -2.2954 | |
| 123 | T | A | -2.0438 | |
| 124 | Q | A | -1.8143 | |
| 125 | Y | A | -1.5009 | |
| 126 | E | A | -1.9213 | |
| 127 | A | A | -1.0209 | |
| 128 | I | A | -0.6215 | |
| 129 | G | A | -0.9438 | |
| 130 | C | A | -0.4054 | |
| 131 | E | A | -1.2685 | |
| 132 | Y | A | -0.5150 | |
| 133 | N | A | -1.6143 | |
| 134 | N | A | -2.4637 | |
| 135 | S | A | -2.0962 | |
| 136 | E | A | -3.0388 | |
| 137 | R | A | -2.9047 | |
| 138 | C | A | -1.1994 | |
| 139 | M | A | -1.6078 | |
| 140 | K | A | -2.7692 | |
| 141 | Q | A | -2.5706 | |
| 142 | I | A | -1.1277 | |
| 143 | E | A | -2.2844 | |
| 144 | D | A | -3.5653 | |
| 145 | K | A | -2.9713 | |
| 146 | I | A | -1.3432 | |
| 147 | E | A | -2.6452 | |
| 148 | E | A | -2.9051 | |
| 149 | I | A | -0.9209 | |
| 150 | E | A | -1.0084 | |
| 151 | S | A | -1.1711 | |
| 152 | K | A | -0.8900 | |
| 153 | V | A | 0.4579 | |
| 154 | W | A | 0.3578 | |
| 155 | T | A | 0.4302 | |
| 156 | Y | A | 1.0085 | |
| 157 | N | A | 0.2057 | |
| 158 | A | A | 0.0000 | |
| 159 | E | A | 0.0746 | |
| 160 | L | A | 0.9347 | |
| 161 | L | A | 0.7725 | |
| 162 | V | A | 0.0000 | |
| 163 | L | A | 0.2297 | |
| 164 | M | A | 0.4421 | |
| 165 | E | A | -0.7769 | |
| 166 | N | A | 0.0000 | |
| 167 | E | A | -1.6931 | |
| 168 | R | A | -2.5519 | |
| 169 | T | A | 0.0000 | |
| 170 | L | A | -1.8743 | |
| 171 | D | A | -2.7720 | |
| 172 | F | A | -1.2151 | |
| 173 | H | A | 0.0000 | |
| 174 | D | A | -1.9846 | |
| 175 | S | A | -1.4850 | |
| 176 | N | A | -1.6001 | |
| 177 | V | A | 0.0000 | |
| 178 | K | A | -2.2764 | |
| 179 | N | A | -2.8241 | |
| 180 | L | A | 0.0000 | |
| 181 | Y | A | 0.0000 | |
| 182 | D | A | -2.4104 | |
| 183 | K | A | -1.7479 | |
| 184 | V | A | 0.0000 | |
| 185 | R | A | -2.3323 | |
| 186 | L | A | -0.3881 | |
| 187 | Q | A | -1.1204 | |
| 188 | L | A | 0.0000 | |
| 189 | R | A | -2.5258 | |
| 190 | D | A | -2.3648 | |
| 191 | N | A | 0.0000 | |
| 192 | A | A | 0.0000 | |
| 193 | K | A | -3.1631 | |
| 194 | E | A | -2.4885 | |
| 195 | L | A | -0.9756 | |
| 196 | G | A | -0.9759 | |
| 197 | N | A | -0.9300 | |
| 198 | G | A | 0.0000 | |
| 199 | C | A | -0.8485 | |
| 200 | F | A | 0.0000 | |
| 201 | E | A | -2.3071 | |
| 202 | F | A | 0.0000 | |
| 203 | Y | A | -1.6939 | |
| 204 | H | A | 0.0000 | |
| 205 | K | A | -2.5843 | |
| 206 | C | A | 0.0000 | |
| 207 | D | A | -3.6959 | |
| 208 | N | A | -3.7134 | |
| 209 | E | A | -3.4202 | |
| 210 | C | A | 0.0000 | |
| 211 | M | A | 0.0000 | |
| 212 | E | A | -3.4490 | |
| 213 | S | A | -2.6286 | |
| 214 | V | A | 0.0000 | |
| 215 | R | A | -1.9419 | |
| 216 | N | A | -2.0207 | |
| 217 | G | A | -1.5193 | |
| 218 | T | A | -1.3994 | |
| 219 | Y | A | 0.0000 | |
| 220 | D | A | -2.1861 | |
| 221 | Y | A | -1.7290 | |
| 222 | P | A | -1.6238 | |
| 223 | Q | A | -2.1806 | |
| 224 | Y | A | -1.9498 | |
| 225 | S | A | -2.1001 | |
| 226 | E | A | -2.5680 | |
| 227 | E | A | -2.6963 | |
| 228 | A | A | 0.0000 | |
| 229 | R | A | -2.1090 | |
| 230 | L | A | -0.9883 | |
| 231 | K | A | -1.6786 | |
| 232 | R | A | -1.3118 | |
| 233 | E | A | -0.5952 | |
| 234 | E | A | -1.2253 | |
| 235 | I | A | 0.6980 | |
| 236 | S | A | 0.0374 | |
| 237 | G | A | -0.1925 | |
| 238 | V | A | 0.6256 | |
| 239 | K | A | -0.9579 | |
| 240 | L | A | 0.2293 | |
| 241 | E | A | -1.0240 | |
| 242 | S | A | -0.2000 | |
| 243 | V | A | 1.3447 | |
| 244 | G | A | 0.1996 | |
| 245 | T | A | 0.1680 | |
| 246 | Y | A | 0.0516 | |
| 247 | Q | A | -2.2919 | |
| 248 | R | A | -3.6700 | |
| 249 | R | A | -4.2203 | |
| 250 | K | A | -4.1701 | |
| 251 | R | A | -3.3902 |