Project name: query_structure

Status: done

Started: 2026-03-17 00:51:21
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Chain sequence(s) A: QVQLVESGGGLVQAGGSLRLSSAASGFPVSSSTMTWYRQAPGKEREWVAAIWSYGWSTKYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYSNVKDYGTFWEIYDYWGQGTQVTVS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:31)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:31)
Show buried residues

Minimal score value
-3.5781
Maximal score value
2.3768
Average score
-0.6015
Total score value
-72.177

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.3945
2 V A -0.5325
3 Q A -1.0223
4 L A 0.0000
5 V A 0.7649
6 E A 0.0000
7 S A -0.6404
8 G A -1.0163
9 G A -0.7815
10 G A -0.0010
11 L A 1.0316
12 V A 0.0155
13 Q A -1.2304
14 A A -1.4888
15 G A -1.4348
16 G A -0.9888
17 S A -1.3785
18 L A -0.9908
19 R A -2.1833
20 L A 0.0000
21 S A -0.4577
22 S A 0.0000
23 A A -0.2408
24 A A 0.0000
25 S A -0.7767
26 G A -1.0332
27 F A 0.0000
28 P A -0.9827
29 V A 0.0000
30 S A -0.3044
31 S A 0.0331
32 S A 0.0000
33 T A 0.0000
34 M A 0.0000
35 T A 0.0000
36 W A 0.0000
37 Y A -0.3089
38 R A -1.1872
39 Q A -2.0776
40 A A -2.0332
41 P A -1.4359
42 G A -1.9803
43 K A -3.3857
44 E A -3.5781
45 R A -2.7698
46 E A -1.7654
47 W A -0.5737
48 V A 0.0000
49 A A 0.0000
50 A A 0.0000
51 I A 0.0000
52 W A 0.5867
53 S A 0.9042
54 Y A 1.3990
55 G A 0.7459
56 W A 1.4933
57 S A 0.2528
58 T A -0.6349
59 K A -2.0160
60 Y A -1.6955
61 A A -1.6895
62 D A -2.6160
63 S A -1.7273
64 V A 0.0000
65 K A -2.8694
66 G A -1.8742
67 R A -1.7475
68 F A 0.0000
69 T A -1.2519
70 I A 0.0000
71 S A -0.6438
72 R A -1.1114
73 D A -2.0048
74 N A -2.2226
75 A A -1.7538
76 K A -2.4785
77 N A -1.9557
78 T A 0.0000
79 V A 0.0000
80 Y A 0.0000
81 L A 0.0000
82 Q A -1.5682
83 M A 0.0000
84 N A -1.9515
85 S A -1.4360
86 L A 0.0000
87 K A -2.4956
88 P A -1.9592
89 E A -2.3794
90 D A 0.0000
91 T A -0.9648
92 A A 0.0000
93 V A -0.5364
94 Y A 0.0000
95 Y A -0.1622
96 S A 0.0000
97 N A 0.0000
98 V A 0.0000
99 K A -0.7329
100 D A -0.0834
101 Y A 1.2430
102 G A 1.0250
103 T A 1.1247
104 F A 2.3768
105 W A 2.1396
106 E A 0.6799
107 I A 0.9815
108 Y A 0.7547
109 D A -0.7673
110 Y A -0.2175
111 W A 0.0830
112 G A -0.1206
113 Q A -0.8488
114 G A -0.5084
115 T A -0.7442
116 Q A -1.0244
117 V A 0.0000
118 T A -0.2821
119 V A 0.0000
120 S A -0.7613
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Laboratory of Theory of Biopolymers 2018