| Chain sequence(s) |
B: AMEAMMAAMKRGEEVMVEIYKLIGNEEGAKKAKEMMEKAKAVMLAAMAAE
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:17)
[INFO] Main: Simulation completed successfully. (00:02:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | B | -0.1366 | |
| 2 | M | B | 0.0570 | |
| 3 | E | B | -1.3296 | |
| 4 | A | B | -0.5639 | |
| 5 | M | B | -0.3400 | |
| 6 | M | B | -0.8144 | |
| 7 | A | B | -1.2906 | |
| 8 | A | B | -1.3632 | |
| 9 | M | B | -1.8901 | |
| 10 | K | B | -3.2455 | |
| 11 | R | B | -2.8970 | |
| 12 | G | B | -1.9670 | |
| 13 | E | B | -2.7319 | |
| 14 | E | B | -2.5963 | |
| 15 | V | B | -0.3795 | |
| 16 | M | B | -0.8420 | |
| 17 | V | B | 0.0000 | |
| 18 | E | B | -1.3351 | |
| 19 | I | B | 0.6506 | |
| 20 | Y | B | -0.9302 | |
| 21 | K | B | -1.5973 | |
| 22 | L | B | 1.1667 | |
| 23 | I | B | 1.5556 | |
| 24 | G | B | -0.7425 | |
| 25 | N | B | -2.4312 | |
| 26 | E | B | -3.9149 | |
| 27 | E | B | -4.3666 | |
| 28 | G | B | 0.0000 | |
| 29 | A | B | 0.0000 | |
| 30 | K | B | -4.6328 | |
| 31 | K | B | -4.3595 | |
| 32 | A | B | 0.0000 | |
| 33 | K | B | -4.4538 | |
| 34 | E | B | -4.3147 | |
| 35 | M | B | -2.6313 | |
| 36 | M | B | -2.7784 | |
| 37 | E | B | -3.7061 | |
| 38 | K | B | -2.5416 | |
| 39 | A | B | -0.9864 | |
| 40 | K | B | -1.0008 | |
| 41 | A | B | 0.1456 | |
| 42 | V | B | 1.4629 | |
| 43 | M | B | 1.2854 | |
| 44 | L | B | 1.4753 | |
| 45 | A | B | 1.1258 | |
| 46 | A | B | 0.6851 | |
| 47 | M | B | 0.5663 | |
| 48 | A | B | 0.2302 | |
| 49 | A | B | -0.4527 | |
| 50 | E | B | -1.5376 |