| Chain sequence(s) |
A: GHKGHKS
C: GHKGHKS B: GHKGHKS E: GHKGHKS D: GHKGHKS G: GHKGHKS F: GHKGHKS I: GHKGHKS H: GHKGHKS K: GHKGHKS J: GHKGHKS L: GHKGHKS input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:10:30)
[INFO] Main: Simulation completed successfully. (00:10:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.7078 | |
| 2 | H | A | -2.0371 | |
| 3 | K | A | -2.5858 | |
| 4 | G | A | 0.0000 | |
| 5 | H | A | 0.0000 | |
| 6 | K | A | -1.9932 | |
| 7 | S | A | -1.2127 | |
| 1 | G | B | -1.4920 | |
| 2 | H | B | -2.2612 | |
| 3 | K | B | -2.4280 | |
| 4 | G | B | -2.2527 | |
| 5 | H | B | -2.4558 | |
| 6 | K | B | -2.3837 | |
| 7 | S | B | -1.2538 | |
| 1 | G | C | -1.4370 | |
| 2 | H | C | -2.1431 | |
| 3 | K | C | -2.9955 | |
| 4 | G | C | -2.5293 | |
| 5 | H | C | -2.5452 | |
| 6 | K | C | -2.6782 | |
| 7 | S | C | -1.3813 | |
| 1 | G | D | -1.6830 | |
| 2 | H | D | -1.9871 | |
| 3 | K | D | -2.3910 | |
| 4 | G | D | 0.0000 | |
| 5 | H | D | 0.0000 | |
| 6 | K | D | -2.1161 | |
| 7 | S | D | -1.2903 | |
| 1 | G | E | -1.5307 | |
| 2 | H | E | -1.7303 | |
| 3 | K | E | -2.0766 | |
| 4 | G | E | 0.0000 | |
| 5 | H | E | 0.0000 | |
| 6 | K | E | -1.7163 | |
| 7 | S | E | -1.0925 | |
| 1 | G | F | -1.6836 | |
| 2 | H | F | -2.0267 | |
| 3 | K | F | -2.3863 | |
| 4 | G | F | 0.0000 | |
| 5 | H | F | 0.0000 | |
| 6 | K | F | -1.9025 | |
| 7 | S | F | -1.1853 | |
| 1 | G | G | -1.5751 | |
| 2 | H | G | -2.0977 | |
| 3 | K | G | -2.9181 | |
| 4 | G | G | 0.0000 | |
| 5 | H | G | -2.4467 | |
| 6 | K | G | -2.5295 | |
| 7 | S | G | -1.2538 | |
| 1 | G | H | -1.8786 | |
| 2 | H | H | -2.7767 | |
| 3 | K | H | -3.6005 | |
| 4 | G | H | -2.8492 | |
| 5 | H | H | -3.0515 | |
| 6 | K | H | -3.0061 | |
| 7 | S | H | -1.4800 | |
| 1 | G | I | -1.9479 | |
| 2 | H | I | -2.6443 | |
| 3 | K | I | -2.9392 | |
| 4 | G | I | 0.0000 | |
| 5 | H | I | 0.0000 | |
| 6 | K | I | -2.2480 | |
| 7 | S | I | -1.3536 | |
| 1 | G | J | -1.5912 | |
| 2 | H | J | -1.9295 | |
| 3 | K | J | -1.9867 | |
| 4 | G | J | 0.0000 | |
| 5 | H | J | 0.0000 | |
| 6 | K | J | -1.6586 | |
| 7 | S | J | -0.9990 | |
| 1 | G | K | -1.4415 | |
| 2 | H | K | -1.5909 | |
| 3 | K | K | -1.7052 | |
| 4 | G | K | 0.0000 | |
| 5 | H | K | 0.0000 | |
| 6 | K | K | -1.7337 | |
| 7 | S | K | -1.1596 | |
| 1 | G | L | -1.5524 | |
| 2 | H | L | -1.6862 | |
| 3 | K | L | -1.8095 | |
| 4 | G | L | 0.0000 | |
| 5 | H | L | 0.0000 | |
| 6 | K | L | -1.7476 | |
| 7 | S | L | -1.0169 |