Project name: 7d20d5fc819f463

Status: done

Started: 2026-05-21 11:27:41
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Chain sequence(s) A: GHKGHKS
C: GHKGHKS
B: GHKGHKS
E: GHKGHKS
D: GHKGHKS
G: GHKGHKS
F: GHKGHKS
I: GHKGHKS
H: GHKGHKS
K: GHKGHKS
J: GHKGHKS
L: GHKGHKS
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:10:30)
[INFO]       Main:     Simulation completed successfully.                                          (00:10:34)
Show buried residues

Minimal score value
-3.6005
Maximal score value
0.0
Average score
-1.5807
Total score value
-132.7767

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.7078
2 H A -2.0371
3 K A -2.5858
4 G A 0.0000
5 H A 0.0000
6 K A -1.9932
7 S A -1.2127
1 G B -1.4920
2 H B -2.2612
3 K B -2.4280
4 G B -2.2527
5 H B -2.4558
6 K B -2.3837
7 S B -1.2538
1 G C -1.4370
2 H C -2.1431
3 K C -2.9955
4 G C -2.5293
5 H C -2.5452
6 K C -2.6782
7 S C -1.3813
1 G D -1.6830
2 H D -1.9871
3 K D -2.3910
4 G D 0.0000
5 H D 0.0000
6 K D -2.1161
7 S D -1.2903
1 G E -1.5307
2 H E -1.7303
3 K E -2.0766
4 G E 0.0000
5 H E 0.0000
6 K E -1.7163
7 S E -1.0925
1 G F -1.6836
2 H F -2.0267
3 K F -2.3863
4 G F 0.0000
5 H F 0.0000
6 K F -1.9025
7 S F -1.1853
1 G G -1.5751
2 H G -2.0977
3 K G -2.9181
4 G G 0.0000
5 H G -2.4467
6 K G -2.5295
7 S G -1.2538
1 G H -1.8786
2 H H -2.7767
3 K H -3.6005
4 G H -2.8492
5 H H -3.0515
6 K H -3.0061
7 S H -1.4800
1 G I -1.9479
2 H I -2.6443
3 K I -2.9392
4 G I 0.0000
5 H I 0.0000
6 K I -2.2480
7 S I -1.3536
1 G J -1.5912
2 H J -1.9295
3 K J -1.9867
4 G J 0.0000
5 H J 0.0000
6 K J -1.6586
7 S J -0.9990
1 G K -1.4415
2 H K -1.5909
3 K K -1.7052
4 G K 0.0000
5 H K 0.0000
6 K K -1.7337
7 S K -1.1596
1 G L -1.5524
2 H L -1.6862
3 K L -1.8095
4 G L 0.0000
5 H L 0.0000
6 K L -1.7476
7 S L -1.0169
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Laboratory of Theory of Biopolymers 2018