| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEYVHCGADDRVNFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPDGHPLPDAPPPSPLYVPPPPDSPYWTRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPENNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9477 | |
| 2 | L | A | 1.9685 | |
| 3 | P | A | 0.6510 | |
| 4 | P | A | 0.3652 | |
| 5 | T | A | 0.1172 | |
| 6 | T | A | 0.1257 | |
| 7 | P | A | 0.1824 | |
| 8 | V | A | 1.2202 | |
| 9 | A | A | 0.0304 | |
| 10 | K | A | -1.1633 | |
| 11 | V | A | -0.4131 | |
| 12 | Q | A | -1.5260 | |
| 13 | S | A | -1.5975 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3957 | |
| 16 | E | A | -2.4276 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4588 | |
| 20 | P | A | 0.1313 | |
| 21 | T | A | 0.1642 | |
| 22 | S | A | -0.0947 | |
| 23 | L | A | 0.0977 | |
| 24 | F | A | -0.0192 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1210 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.6011 | |
| 31 | R | A | -2.5368 | |
| 32 | L | A | -0.7047 | |
| 33 | L | A | 1.2539 | |
| 34 | T | A | 1.4686 | |
| 35 | V | A | 2.0129 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2229 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6209 | |
| 40 | K | A | -1.6473 | |
| 41 | D | A | -0.9482 | |
| 42 | I | A | 0.8090 | |
| 43 | V | A | 1.0073 | |
| 44 | K | A | -1.1946 | |
| 45 | N | A | -1.9290 | |
| 46 | G | A | -1.2331 | |
| 47 | K | A | -0.9462 | |
| 48 | V | A | 1.5007 | |
| 49 | V | A | 2.0559 | |
| 50 | V | A | 1.2933 | |
| 51 | P | A | 0.4847 | |
| 52 | K | A | -0.6224 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1579 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3663 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2704 | |
| 70 | K | A | -1.8113 | |
| 71 | F | A | -0.6677 | |
| 72 | A | A | -0.5868 | |
| 73 | L | A | -0.8632 | |
| 74 | P | A | -1.2594 | |
| 75 | Q | A | -2.4915 | |
| 76 | K | A | -3.1065 | |
| 77 | D | A | -2.9973 | |
| 78 | F | A | -1.6557 | |
| 79 | Y | A | -1.9339 | |
| 80 | D | A | -2.7768 | |
| 81 | P | A | -2.3535 | |
| 82 | E | A | -3.0735 | |
| 83 | K | A | -3.4499 | |
| 84 | E | A | -2.5116 | |
| 85 | R | A | -1.3164 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6317 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9702 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3645 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6697 | |
| 99 | G | A | -0.5349 | |
| 100 | P | A | -0.4112 | |
| 101 | L | A | 0.0252 | |
| 102 | G | A | -0.2491 | |
| 103 | K | A | -0.6824 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4516 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.0991 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1583 | |
| 110 | L | A | -0.1243 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.3172 | |
| 113 | K | A | -0.6875 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -1.0026 | |
| 116 | D | A | -1.7440 | |
| 117 | T | A | -1.3601 | |
| 118 | E | A | -2.5783 | |
| 119 | N | A | -2.5951 | |
| 120 | P | A | -1.9888 | |
| 121 | T | A | -1.5162 | |
| 122 | E | A | -1.8096 | |
| 123 | Y | A | -0.1677 | |
| 124 | V | A | -0.0532 | |
| 125 | H | A | -0.3734 | |
| 126 | C | A | -0.7107 | |
| 127 | G | A | -1.1285 | |
| 128 | A | A | -1.2342 | |
| 129 | D | A | -2.2216 | |
| 130 | D | A | -1.7793 | |
| 131 | R | A | -1.4745 | |
| 132 | V | A | -0.5068 | |
| 133 | N | A | -0.8931 | |
| 134 | F | A | -0.3860 | |
| 135 | S | A | -0.3653 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6831 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5707 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2202 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1465 | |
| 157 | D | A | 0.3518 | |
| 158 | L | A | 0.8606 | |
| 159 | A | A | 0.1933 | |
| 160 | E | A | -1.4387 | |
| 161 | P | A | -0.2452 | |
| 162 | C | A | 0.1487 | |
| 163 | P | A | -0.2063 | |
| 164 | G | A | -0.1337 | |
| 165 | L | A | 0.4743 | |
| 166 | P | A | -0.1696 | |
| 167 | P | A | -0.3675 | |
| 168 | G | A | -0.4337 | |
| 169 | A | A | -0.0428 | |
| 170 | C | A | 0.6535 | |
| 171 | P | A | 0.5248 | |
| 172 | P | A | 0.6973 | |
| 173 | I | A | 1.9856 | |
| 174 | Q | A | 0.8344 | |
| 175 | L | A | 1.4605 | |
| 176 | V | A | 0.8283 | |
| 177 | N | A | -0.3241 | |
| 178 | S | A | 0.0319 | |
| 179 | V | A | 0.4438 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3825 | |
| 182 | D | A | 0.0787 | |
| 183 | G | A | -0.1570 | |
| 184 | D | A | -0.5389 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1567 | |
| 190 | F | A | 0.0614 | |
| 191 | G | A | -0.1041 | |
| 192 | N | A | -0.2636 | |
| 193 | M | A | -0.1171 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4103 | |
| 197 | E | A | -2.5966 | |
| 198 | L | A | -1.2145 | |
| 199 | Q | A | -2.5613 | |
| 200 | Q | A | -3.3499 | |
| 201 | D | A | -3.6112 | |
| 202 | R | A | -3.3479 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2035 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3691 | |
| 211 | S | A | -1.8876 | |
| 212 | T | A | -1.4298 | |
| 213 | R | A | -2.0672 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1656 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3308 | |
| 220 | L | A | 0.5590 | |
| 221 | K | A | -1.1943 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9234 | |
| 224 | N | A | -1.5315 | |
| 225 | E | A | -1.2839 | |
| 226 | A | A | -0.6672 | |
| 227 | Y | A | -0.4412 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7023 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1373 | |
| 234 | F | A | 0.0337 | |
| 235 | G | A | -0.9255 | |
| 236 | R | A | -2.6864 | |
| 237 | R | A | -2.9592 | |
| 238 | E | A | -2.1344 | |
| 239 | Q | A | -0.1381 | |
| 240 | V | A | 1.4003 | |
| 241 | Y | A | 1.2400 | |
| 242 | A | A | 0.1574 | |
| 243 | R | A | -1.3321 | |
| 244 | H | A | -1.2132 | |
| 245 | F | A | -0.2495 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.6059 | |
| 249 | C | A | -0.9248 | |
| 250 | G | A | -0.8676 | |
| 251 | P | A | -0.8973 | |
| 252 | D | A | -1.4254 | |
| 253 | G | A | -1.2948 | |
| 254 | H | A | -1.4814 | |
| 255 | P | A | -1.3621 | |
| 256 | L | A | -0.4160 | |
| 257 | P | A | -0.8753 | |
| 258 | D | A | -1.8892 | |
| 259 | A | A | -0.6667 | |
| 260 | P | A | -0.7060 | |
| 261 | P | A | -0.2037 | |
| 262 | P | A | 0.0780 | |
| 263 | S | A | 0.3103 | |
| 264 | P | A | 0.6808 | |
| 265 | L | A | 1.8604 | |
| 266 | Y | A | 1.5477 | |
| 267 | V | A | 1.9404 | |
| 268 | P | A | 0.8332 | |
| 269 | P | A | 0.4096 | |
| 270 | P | A | -0.3981 | |
| 271 | P | A | -0.8726 | |
| 272 | D | A | -1.6869 | |
| 273 | S | A | -0.4863 | |
| 274 | P | A | 0.0907 | |
| 275 | Y | A | 1.0502 | |
| 276 | W | A | 0.7318 | |
| 277 | T | A | 0.1210 | |
| 278 | R | A | -0.0122 | |
| 279 | P | A | -0.1820 | |
| 280 | P | A | -0.7016 | |
| 281 | T | A | -0.6085 | |
| 282 | D | A | -0.9400 | |
| 283 | Y | A | 0.8123 | |
| 284 | F | A | 0.6933 | |
| 285 | G | A | 0.1275 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9299 | |
| 291 | L | A | 1.4591 | |
| 292 | V | A | 0.6145 | |
| 293 | S | A | -0.1639 | |
| 294 | S | A | -0.9686 | |
| 295 | D | A | -1.8441 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1433 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6507 | |
| 301 | R | A | -1.9009 | |
| 302 | P | A | -0.9774 | |
| 303 | F | A | -0.1897 | |
| 304 | W | A | -0.5191 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0809 | |
| 307 | R | A | -2.9209 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6558 | |
| 310 | G | A | -1.4168 | |
| 311 | N | A | -1.3848 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9562 | |
| 319 | N | A | -0.9021 | |
| 320 | E | A | -1.0647 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3465 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1557 | |
| 333 | N | A | 0.4182 | |
| 334 | F | A | 1.4756 | |
| 335 | T | A | 0.7449 | |
| 336 | I | A | 0.4018 | |
| 337 | S | A | -0.9811 | |
| 338 | Q | A | -1.7335 | |
| 339 | Q | A | -1.2918 | |
| 340 | L | A | 0.6713 | |
| 341 | C | A | 0.2969 | |
| 342 | T | A | -0.3082 | |
| 343 | P | A | -0.8923 | |
| 344 | E | A | -2.2548 | |
| 345 | N | A | -2.0482 | |
| 346 | N | A | -1.4184 | |
| 347 | V | A | 0.6203 | |
| 348 | Y | A | 0.9750 | |
| 349 | D | A | -0.2001 | |
| 350 | P | A | -0.4069 | |
| 351 | S | A | -0.3127 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7677 | |
| 354 | K | A | -1.7660 | |
| 355 | N | A | -1.7541 | |
| 356 | Y | A | -0.1069 | |
| 357 | L | A | 0.5689 | |
| 358 | R | A | 0.9181 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4785 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | 0.0071 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8686 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6505 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2808 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3325 | |
| 376 | L | A | -1.7643 | |
| 377 | D | A | -2.0485 | |
| 378 | P | A | -1.0697 | |
| 379 | G | A | -1.0277 | |
| 380 | V | A | -0.9376 | |
| 381 | L | A | -0.5513 | |
| 382 | A | A | -0.6671 | |
| 383 | H | A | -0.8535 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4099 | |
| 386 | T | A | -0.5823 | |
| 387 | M | A | -0.3379 | |
| 388 | N | A | -0.8769 | |
| 389 | P | A | -1.2889 | |
| 390 | T | A | -1.5848 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5450 | |
| 393 | E | A | -2.9576 | |
| 394 | N | A | -2.6840 | |
| 395 | W | A | -1.5300 | |
| 396 | N | A | -1.1423 | |
| 397 | L | A | -0.1837 | |
| 398 | G | A | 0.5562 | |
| 399 | F | A | 2.4334 | |
| 400 | V | A | 1.8612 | |
| 401 | P | A | 0.0746 | |
| 402 | P | A | -1.9519 | |
| 403 | K | A | -3.4989 | |
| 404 | E | A | -4.0024 | |
| 405 | R | A | -4.4347 | |
| 406 | E | A | -3.9972 | |
| 407 | D | A | -2.9514 | |
| 408 | P | A | -1.8099 | |
| 409 | Y | A | -0.9810 | |
| 410 | K | A | -2.0991 | |
| 411 | G | A | -0.6368 | |
| 412 | L | A | 0.6717 | |
| 413 | I | A | 1.5794 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4196 | |
| 416 | E | A | -1.7200 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8647 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8869 | |
| 421 | E | A | -2.4946 | |
| 422 | R | A | -1.9732 | |
| 423 | F | A | -1.0108 | |
| 424 | S | A | -1.3184 | |
| 425 | Q | A | -1.7557 | |
| 426 | D | A | -2.9028 | |
| 427 | L | A | -2.0125 | |
| 428 | D | A | -2.8131 | |
| 429 | Q | A | -2.6298 | |
| 430 | F | A | -1.4656 | |
| 431 | A | A | -0.9209 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6302 | |
| 435 | K | A | -0.7574 | |
| 436 | F | A | 0.1298 | |
| 437 | L | A | 1.0142 | |
| 438 | Y | A | 0.8097 | |
| 439 | Q | A | -0.2751 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine