| Chain sequence(s) |
A: QDKCKKVAENAPVSKCQLANQCNADCKLDKHARSGECFADEKRNLQCICDACEA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:35)
[INFO] Main: Simulation completed successfully. (00:01:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -2.7859 | |
| 2 | D | A | -3.2227 | |
| 3 | K | A | -3.2897 | |
| 4 | C | A | -2.0374 | |
| 5 | K | A | -1.9721 | |
| 6 | K | A | -1.3230 | |
| 7 | V | A | 0.3145 | |
| 8 | A | A | -1.1839 | |
| 9 | E | A | -2.3094 | |
| 10 | N | A | -1.9874 | |
| 11 | A | A | -0.8371 | |
| 12 | P | A | -0.1331 | |
| 13 | V | A | 1.0812 | |
| 14 | S | A | 0.3083 | |
| 15 | K | A | -0.3776 | |
| 16 | C | A | -0.2773 | |
| 17 | Q | A | -0.6137 | |
| 18 | L | A | 0.0578 | |
| 19 | A | A | -1.0413 | |
| 20 | N | A | -1.8964 | |
| 21 | Q | A | -1.9629 | |
| 22 | C | A | 0.0000 | |
| 23 | N | A | -2.1033 | |
| 24 | A | A | -1.8391 | |
| 25 | D | A | -1.8187 | |
| 26 | C | A | 0.0000 | |
| 27 | K | A | -2.7455 | |
| 28 | L | A | -0.7157 | |
| 29 | D | A | -1.9921 | |
| 30 | K | A | -2.7802 | |
| 31 | H | A | -2.4689 | |
| 32 | A | A | 0.0000 | |
| 33 | R | A | -3.2857 | |
| 34 | S | A | -2.4183 | |
| 35 | G | A | -2.1644 | |
| 36 | E | A | -1.4987 | |
| 37 | C | A | 0.0900 | |
| 38 | F | A | 0.2437 | |
| 39 | A | A | -1.7802 | |
| 40 | D | A | -3.4414 | |
| 41 | E | A | -3.9958 | |
| 42 | K | A | -4.1519 | |
| 43 | R | A | -4.0066 | |
| 44 | N | A | -2.6790 | |
| 45 | L | A | -0.9973 | |
| 46 | Q | A | -0.6265 | |
| 47 | C | A | 0.0000 | |
| 48 | I | A | -0.3184 | |
| 49 | C | A | 0.0000 | |
| 50 | D | A | -2.2004 | |
| 51 | A | A | -2.3407 | |
| 52 | C | A | -1.3932 | |
| 53 | E | A | -2.2094 | |
| 54 | A | A | -1.6415 |