Project name: GSGHKFF20

Status: done

Started: 2026-02-20 08:34:51
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Chain sequence(s) A: GSGHKFF
C: GSGHKFF
B: GSGHKFF
E: GSGHKFF
D: GSGHKFF
G: GSGHKFF
F: GSGHKFF
I: GSGHKFF
H: GSGHKFF
K: GSGHKFF
J: GSGHKFF
M: GSGHKFF
L: GSGHKFF
O: GSGHKFF
N: GSGHKFF
Q: GSGHKFF
P: GSGHKFF
S: GSGHKFF
R: GSGHKFF
T: GSGHKFF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:14:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:14:05)
Show buried residues

Minimal score value
-2.5619
Maximal score value
3.9713
Average score
-0.4022
Total score value
-56.3069

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.8479
2 S A -1.2253
3 G A -1.3408
4 H A -1.1181
5 K A -0.0454
6 F A 2.0609
7 F A 2.0358
1 G B -0.9984
2 S B -1.1633
3 G B -1.3362
4 H B -0.8725
5 K B 0.3050
6 F B 2.1821
7 F B 2.5530
1 G C -0.8322
2 S C -1.1020
3 G C -1.3587
4 H C -1.5490
5 K C -0.3433
6 F C 1.0392
7 F C 2.2699
1 G D -0.8123
2 S D -1.1690
3 G D -1.1990
4 H D -1.0409
5 K D -0.9262
6 F D 1.5270
7 F D 2.3510
1 G E -0.9072
2 S E -1.2201
3 G E -1.1689
4 H E -1.2451
5 K E 0.0000
6 F E 1.1037
7 F E 1.5087
1 G F -0.9485
2 S F -1.2299
3 G F -1.3141
4 H F -1.7959
5 K F -1.5825
6 F F -0.0580
7 F F 0.0000
1 G G -1.0058
2 S G -1.3147
3 G G -1.6756
4 H G -1.8938
5 K G -1.0139
6 F G 0.3233
7 F G 1.6116
1 G H -0.8424
2 S H -1.1155
3 G H -1.8941
4 H H -2.3997
5 K H -2.3224
6 F H -0.2625
7 F H 1.1725
1 G I -1.0131
2 S I -1.1533
3 G I -1.6476
4 H I -1.6636
5 K I -1.5487
6 F I 0.0000
7 F I 1.3319
1 G J -1.0670
2 S J -1.0958
3 G J -1.4751
4 H J -1.1174
5 K J 0.2204
6 F J 2.7405
7 F J 3.8757
1 G K -0.8852
2 S K -1.1471
3 G K -1.2694
4 H K -1.0694
5 K K -0.6036
6 F K 1.8957
7 F K 3.9713
1 G L -1.2939
2 S L -1.1972
3 G L 0.0000
4 H L -1.2931
5 K L -0.4851
6 F L 0.0000
7 F L 3.1793
1 G M -1.4305
2 S M -1.3090
3 G M -1.5277
4 H M -1.0333
5 K M -0.2324
6 F M 2.0408
7 F M 3.2006
1 G N -1.0210
2 S N -1.3489
3 G N -1.7245
4 H N -1.2189
5 K N 0.1844
6 F N 0.0000
7 F N 3.9627
1 G O -0.8090
2 S O -1.2103
3 G O -1.5590
4 H O -1.8606
5 K O -1.2482
6 F O 1.9056
7 F O 3.6479
1 G P -0.8245
2 S P -0.8531
3 G P -1.6439
4 H P -1.3612
5 K P -0.4524
6 F P 1.5713
7 F P 3.8889
1 G Q -0.7807
2 S Q -1.1824
3 G Q -1.5661
4 H Q -1.9048
5 K Q -1.8076
6 F Q 0.6559
7 F Q 2.0237
1 G R -0.8392
2 S R -1.1522
3 G R -1.9034
4 H R -2.1685
5 K R -2.2541
6 F R 0.3396
7 F R 1.7041
1 G S -0.8244
2 S S -1.4584
3 G S -1.8532
4 H S -2.4384
5 K S -2.1536
6 F S 0.4713
7 F S 1.7204
1 G T -0.8514
2 S T -1.1769
3 G T -2.0190
4 H T -2.5619
5 K T -2.4178
6 F T -0.2909
7 F T 0.9074
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Laboratory of Theory of Biopolymers 2018