| Chain sequence(s) |
A: GSGHKFF
C: GSGHKFF B: GSGHKFF E: GSGHKFF D: GSGHKFF G: GSGHKFF F: GSGHKFF I: GSGHKFF H: GSGHKFF K: GSGHKFF J: GSGHKFF M: GSGHKFF L: GSGHKFF O: GSGHKFF N: GSGHKFF Q: GSGHKFF P: GSGHKFF S: GSGHKFF R: GSGHKFF T: GSGHKFF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:14:00)
[INFO] Main: Simulation completed successfully. (00:14:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.8479 | |
| 2 | S | A | -1.2253 | |
| 3 | G | A | -1.3408 | |
| 4 | H | A | -1.1181 | |
| 5 | K | A | -0.0454 | |
| 6 | F | A | 2.0609 | |
| 7 | F | A | 2.0358 | |
| 1 | G | B | -0.9984 | |
| 2 | S | B | -1.1633 | |
| 3 | G | B | -1.3362 | |
| 4 | H | B | -0.8725 | |
| 5 | K | B | 0.3050 | |
| 6 | F | B | 2.1821 | |
| 7 | F | B | 2.5530 | |
| 1 | G | C | -0.8322 | |
| 2 | S | C | -1.1020 | |
| 3 | G | C | -1.3587 | |
| 4 | H | C | -1.5490 | |
| 5 | K | C | -0.3433 | |
| 6 | F | C | 1.0392 | |
| 7 | F | C | 2.2699 | |
| 1 | G | D | -0.8123 | |
| 2 | S | D | -1.1690 | |
| 3 | G | D | -1.1990 | |
| 4 | H | D | -1.0409 | |
| 5 | K | D | -0.9262 | |
| 6 | F | D | 1.5270 | |
| 7 | F | D | 2.3510 | |
| 1 | G | E | -0.9072 | |
| 2 | S | E | -1.2201 | |
| 3 | G | E | -1.1689 | |
| 4 | H | E | -1.2451 | |
| 5 | K | E | 0.0000 | |
| 6 | F | E | 1.1037 | |
| 7 | F | E | 1.5087 | |
| 1 | G | F | -0.9485 | |
| 2 | S | F | -1.2299 | |
| 3 | G | F | -1.3141 | |
| 4 | H | F | -1.7959 | |
| 5 | K | F | -1.5825 | |
| 6 | F | F | -0.0580 | |
| 7 | F | F | 0.0000 | |
| 1 | G | G | -1.0058 | |
| 2 | S | G | -1.3147 | |
| 3 | G | G | -1.6756 | |
| 4 | H | G | -1.8938 | |
| 5 | K | G | -1.0139 | |
| 6 | F | G | 0.3233 | |
| 7 | F | G | 1.6116 | |
| 1 | G | H | -0.8424 | |
| 2 | S | H | -1.1155 | |
| 3 | G | H | -1.8941 | |
| 4 | H | H | -2.3997 | |
| 5 | K | H | -2.3224 | |
| 6 | F | H | -0.2625 | |
| 7 | F | H | 1.1725 | |
| 1 | G | I | -1.0131 | |
| 2 | S | I | -1.1533 | |
| 3 | G | I | -1.6476 | |
| 4 | H | I | -1.6636 | |
| 5 | K | I | -1.5487 | |
| 6 | F | I | 0.0000 | |
| 7 | F | I | 1.3319 | |
| 1 | G | J | -1.0670 | |
| 2 | S | J | -1.0958 | |
| 3 | G | J | -1.4751 | |
| 4 | H | J | -1.1174 | |
| 5 | K | J | 0.2204 | |
| 6 | F | J | 2.7405 | |
| 7 | F | J | 3.8757 | |
| 1 | G | K | -0.8852 | |
| 2 | S | K | -1.1471 | |
| 3 | G | K | -1.2694 | |
| 4 | H | K | -1.0694 | |
| 5 | K | K | -0.6036 | |
| 6 | F | K | 1.8957 | |
| 7 | F | K | 3.9713 | |
| 1 | G | L | -1.2939 | |
| 2 | S | L | -1.1972 | |
| 3 | G | L | 0.0000 | |
| 4 | H | L | -1.2931 | |
| 5 | K | L | -0.4851 | |
| 6 | F | L | 0.0000 | |
| 7 | F | L | 3.1793 | |
| 1 | G | M | -1.4305 | |
| 2 | S | M | -1.3090 | |
| 3 | G | M | -1.5277 | |
| 4 | H | M | -1.0333 | |
| 5 | K | M | -0.2324 | |
| 6 | F | M | 2.0408 | |
| 7 | F | M | 3.2006 | |
| 1 | G | N | -1.0210 | |
| 2 | S | N | -1.3489 | |
| 3 | G | N | -1.7245 | |
| 4 | H | N | -1.2189 | |
| 5 | K | N | 0.1844 | |
| 6 | F | N | 0.0000 | |
| 7 | F | N | 3.9627 | |
| 1 | G | O | -0.8090 | |
| 2 | S | O | -1.2103 | |
| 3 | G | O | -1.5590 | |
| 4 | H | O | -1.8606 | |
| 5 | K | O | -1.2482 | |
| 6 | F | O | 1.9056 | |
| 7 | F | O | 3.6479 | |
| 1 | G | P | -0.8245 | |
| 2 | S | P | -0.8531 | |
| 3 | G | P | -1.6439 | |
| 4 | H | P | -1.3612 | |
| 5 | K | P | -0.4524 | |
| 6 | F | P | 1.5713 | |
| 7 | F | P | 3.8889 | |
| 1 | G | Q | -0.7807 | |
| 2 | S | Q | -1.1824 | |
| 3 | G | Q | -1.5661 | |
| 4 | H | Q | -1.9048 | |
| 5 | K | Q | -1.8076 | |
| 6 | F | Q | 0.6559 | |
| 7 | F | Q | 2.0237 | |
| 1 | G | R | -0.8392 | |
| 2 | S | R | -1.1522 | |
| 3 | G | R | -1.9034 | |
| 4 | H | R | -2.1685 | |
| 5 | K | R | -2.2541 | |
| 6 | F | R | 0.3396 | |
| 7 | F | R | 1.7041 | |
| 1 | G | S | -0.8244 | |
| 2 | S | S | -1.4584 | |
| 3 | G | S | -1.8532 | |
| 4 | H | S | -2.4384 | |
| 5 | K | S | -2.1536 | |
| 6 | F | S | 0.4713 | |
| 7 | F | S | 1.7204 | |
| 1 | G | T | -0.8514 | |
| 2 | S | T | -1.1769 | |
| 3 | G | T | -2.0190 | |
| 4 | H | T | -2.5619 | |
| 5 | K | T | -2.4178 | |
| 6 | F | T | -0.2909 | |
| 7 | F | T | 0.9074 |