| Chain sequence(s) |
B: QRTESIIARALYYDLISGRKKRRQRRRPPQQRTESIIARALYYDLIS
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:09)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:09)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:09)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:09)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:09)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:28)
[INFO] Main: Simulation completed successfully. (00:01:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | B | -2.5390 | |
| 2 | R | B | -2.5000 | |
| 3 | T | B | -1.3231 | |
| 4 | E | B | -1.9853 | |
| 5 | S | B | -0.9740 | |
| 6 | I | B | 0.7457 | |
| 7 | I | B | 1.6105 | |
| 8 | A | B | 0.8807 | |
| 9 | R | B | 0.2586 | |
| 10 | A | B | 1.0494 | |
| 11 | L | B | 1.7545 | |
| 12 | Y | B | 2.5938 | |
| 13 | Y | B | 1.9914 | |
| 14 | D | B | 0.1076 | |
| 15 | L | B | 2.2011 | |
| 16 | I | B | 2.6314 | |
| 17 | S | B | 0.2692 | |
| 18 | G | B | -1.1921 | |
| 19 | R | B | -3.3816 | |
| 20 | K | B | -4.5469 | |
| 21 | K | B | -4.6569 | |
| 22 | R | B | -5.1849 | |
| 23 | R | B | -4.9021 | |
| 24 | Q | B | -5.1334 | |
| 25 | R | B | -4.6651 | |
| 26 | R | B | -4.5676 | |
| 27 | R | B | -3.6994 | |
| 28 | P | B | -2.4943 | |
| 29 | P | B | -2.6583 | |
| 30 | Q | B | -2.5773 | |
| 31 | Q | B | -2.6063 | |
| 32 | R | B | -2.4225 | |
| 33 | T | B | -1.3699 | |
| 34 | E | B | -1.8247 | |
| 35 | S | B | -0.6960 | |
| 36 | I | B | 1.1165 | |
| 37 | I | B | 1.5250 | |
| 38 | A | B | 0.9622 | |
| 39 | R | B | 0.6006 | |
| 40 | A | B | 1.4817 | |
| 41 | L | B | 2.6340 | |
| 42 | Y | B | 2.9841 | |
| 43 | Y | B | 2.4791 | |
| 44 | D | B | 0.8097 | |
| 45 | L | B | 2.6988 | |
| 46 | I | B | 3.0481 | |
| 47 | S | B | 1.1601 |