Project name: query_structure

Status: done

Started: 2026-03-17 00:11:25
Settings
Chain sequence(s) A: MGSSHHHHHHYYLEVDNKFNKEFYNAWWEIRKLPNLNAWQKEAFKTSLKDDPSQSANLLAEAKKLNDAQAPKVD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:14)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:14)
Show buried residues

Minimal score value
-3.3804
Maximal score value
2.1877
Average score
-1.3591
Total score value
-100.5721

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.7748
2 G A -0.2072
3 S A -0.7292
4 S A -1.3250
5 H A -2.0561
6 H A -2.4450
7 H A -2.6129
8 H A -2.4219
9 H A -1.8633
10 H A -0.6460
11 Y A 1.2474
12 Y A 2.1877
13 L A 1.6925
14 E A -0.5236
15 V A 0.4119
16 D A -2.0671
17 N A -2.7384
18 K A -2.4590
19 F A -0.3925
20 N A -1.9652
21 K A -2.9938
22 E A -2.3828
23 F A -1.5126
24 Y A -0.7393
25 N A -1.5366
26 A A 0.0000
27 W A -1.1959
28 W A -0.6560
29 E A -1.3110
30 I A 0.0000
31 R A -3.1430
32 K A -2.6446
33 L A 0.0000
34 P A -1.6538
35 N A -1.5348
36 L A 0.0000
37 N A -1.6020
38 A A -0.9376
39 W A -0.0480
40 Q A -0.9635
41 K A -2.0845
42 E A -2.1762
43 A A -1.1588
44 F A 0.0000
45 K A -1.9641
46 T A -2.0926
47 S A -2.1289
48 L A 0.0000
49 K A -3.1260
50 D A -3.3804
51 D A -2.7763
52 P A -1.7973
53 S A -1.3101
54 Q A -1.9351
55 S A 0.0000
56 A A -1.2666
57 N A -1.8470
58 L A -1.5887
59 L A -1.3965
60 A A -1.8409
61 E A -2.9362
62 A A 0.0000
63 K A -2.7974
64 K A -3.2010
65 L A -1.9682
66 N A 0.0000
67 D A -3.1357
68 A A -1.8284
69 Q A -1.8805
70 A A -1.4582
71 P A -1.2226
72 K A -1.7731
73 V A 0.0048
74 D A -1.5122
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Laboratory of Theory of Biopolymers 2018