| Chain sequence(s) |
A: MGSSHHHHHHYYLEVDNKFNKEFYNAWWEIRKLPNLNAWQKEAFKTSLKDDPSQSANLLAEAKKLNDAQAPKVD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:14)
[INFO] Main: Simulation completed successfully. (00:02:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7748 | |
| 2 | G | A | -0.2072 | |
| 3 | S | A | -0.7292 | |
| 4 | S | A | -1.3250 | |
| 5 | H | A | -2.0561 | |
| 6 | H | A | -2.4450 | |
| 7 | H | A | -2.6129 | |
| 8 | H | A | -2.4219 | |
| 9 | H | A | -1.8633 | |
| 10 | H | A | -0.6460 | |
| 11 | Y | A | 1.2474 | |
| 12 | Y | A | 2.1877 | |
| 13 | L | A | 1.6925 | |
| 14 | E | A | -0.5236 | |
| 15 | V | A | 0.4119 | |
| 16 | D | A | -2.0671 | |
| 17 | N | A | -2.7384 | |
| 18 | K | A | -2.4590 | |
| 19 | F | A | -0.3925 | |
| 20 | N | A | -1.9652 | |
| 21 | K | A | -2.9938 | |
| 22 | E | A | -2.3828 | |
| 23 | F | A | -1.5126 | |
| 24 | Y | A | -0.7393 | |
| 25 | N | A | -1.5366 | |
| 26 | A | A | 0.0000 | |
| 27 | W | A | -1.1959 | |
| 28 | W | A | -0.6560 | |
| 29 | E | A | -1.3110 | |
| 30 | I | A | 0.0000 | |
| 31 | R | A | -3.1430 | |
| 32 | K | A | -2.6446 | |
| 33 | L | A | 0.0000 | |
| 34 | P | A | -1.6538 | |
| 35 | N | A | -1.5348 | |
| 36 | L | A | 0.0000 | |
| 37 | N | A | -1.6020 | |
| 38 | A | A | -0.9376 | |
| 39 | W | A | -0.0480 | |
| 40 | Q | A | -0.9635 | |
| 41 | K | A | -2.0845 | |
| 42 | E | A | -2.1762 | |
| 43 | A | A | -1.1588 | |
| 44 | F | A | 0.0000 | |
| 45 | K | A | -1.9641 | |
| 46 | T | A | -2.0926 | |
| 47 | S | A | -2.1289 | |
| 48 | L | A | 0.0000 | |
| 49 | K | A | -3.1260 | |
| 50 | D | A | -3.3804 | |
| 51 | D | A | -2.7763 | |
| 52 | P | A | -1.7973 | |
| 53 | S | A | -1.3101 | |
| 54 | Q | A | -1.9351 | |
| 55 | S | A | 0.0000 | |
| 56 | A | A | -1.2666 | |
| 57 | N | A | -1.8470 | |
| 58 | L | A | -1.5887 | |
| 59 | L | A | -1.3965 | |
| 60 | A | A | -1.8409 | |
| 61 | E | A | -2.9362 | |
| 62 | A | A | 0.0000 | |
| 63 | K | A | -2.7974 | |
| 64 | K | A | -3.2010 | |
| 65 | L | A | -1.9682 | |
| 66 | N | A | 0.0000 | |
| 67 | D | A | -3.1357 | |
| 68 | A | A | -1.8284 | |
| 69 | Q | A | -1.8805 | |
| 70 | A | A | -1.4582 | |
| 71 | P | A | -1.2226 | |
| 72 | K | A | -1.7731 | |
| 73 | V | A | 0.0048 | |
| 74 | D | A | -1.5122 |