| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIIKDGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTEPQHDSADVRVNFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPVGHPLPSAGPPSPLYTPPPPTSPYAILPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPAPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9400 | |
| 2 | L | A | 1.9618 | |
| 3 | P | A | 0.8378 | |
| 4 | P | A | 0.3707 | |
| 5 | T | A | 0.1228 | |
| 6 | T | A | 0.1290 | |
| 7 | P | A | 0.1540 | |
| 8 | V | A | 1.2052 | |
| 9 | A | A | 0.0879 | |
| 10 | K | A | -1.0131 | |
| 11 | V | A | -0.1523 | |
| 12 | Q | A | -1.4095 | |
| 13 | S | A | -1.5583 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4383 | |
| 16 | E | A | -2.4493 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4567 | |
| 20 | P | A | 0.1262 | |
| 21 | T | A | 0.1607 | |
| 22 | S | A | -0.0935 | |
| 23 | L | A | 0.0993 | |
| 24 | F | A | -0.0270 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2820 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9067 | |
| 31 | R | A | -2.6934 | |
| 32 | L | A | -0.8071 | |
| 33 | L | A | 1.1550 | |
| 34 | T | A | 1.3625 | |
| 35 | V | A | 1.8111 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1809 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.5707 | |
| 40 | K | A | -1.5040 | |
| 41 | D | A | -0.6603 | |
| 42 | I | A | 1.0177 | |
| 43 | I | A | 1.1468 | |
| 44 | K | A | -1.2892 | |
| 45 | D | A | -2.3887 | |
| 46 | G | A | -1.4263 | |
| 47 | K | A | -1.0562 | |
| 48 | V | A | 1.4393 | |
| 49 | V | A | 2.0191 | |
| 50 | V | A | 1.3185 | |
| 51 | P | A | 0.5327 | |
| 52 | K | A | -0.5732 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1212 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3697 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2601 | |
| 70 | K | A | -1.7796 | |
| 71 | F | A | -0.6298 | |
| 72 | A | A | -0.5753 | |
| 73 | L | A | -0.8643 | |
| 74 | P | A | -1.2059 | |
| 75 | Q | A | -2.5069 | |
| 76 | K | A | -3.1082 | |
| 77 | D | A | -2.9908 | |
| 78 | F | A | -1.6666 | |
| 79 | Y | A | -1.8807 | |
| 80 | D | A | -2.6821 | |
| 81 | P | A | -2.3096 | |
| 82 | E | A | -3.0516 | |
| 83 | K | A | -3.3972 | |
| 84 | E | A | -2.4584 | |
| 85 | R | A | -1.2910 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6698 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9752 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3794 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6935 | |
| 99 | G | A | -0.5203 | |
| 100 | P | A | -0.3769 | |
| 101 | L | A | 0.1012 | |
| 102 | G | A | -0.1836 | |
| 103 | K | A | -0.6397 | |
| 104 | G | A | -0.4994 | |
| 105 | S | A | -0.5352 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.1326 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1812 | |
| 110 | L | A | -0.0126 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1162 | |
| 113 | K | A | -0.4155 | |
| 114 | L | A | -1.0632 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.2456 | |
| 117 | T | A | -0.9637 | |
| 118 | E | A | -1.7336 | |
| 119 | N | A | -2.1523 | |
| 120 | P | A | -1.9522 | |
| 121 | T | A | -1.6473 | |
| 122 | E | A | -2.4742 | |
| 123 | P | A | -1.3217 | |
| 124 | Q | A | -1.7877 | |
| 125 | H | A | -1.7657 | |
| 126 | D | A | -2.5152 | |
| 127 | S | A | -1.7831 | |
| 128 | A | A | -1.2737 | |
| 129 | D | A | -2.0464 | |
| 130 | V | A | -1.3054 | |
| 131 | R | A | -1.0127 | |
| 132 | V | A | -0.2746 | |
| 133 | N | A | -0.9029 | |
| 134 | F | A | -0.3857 | |
| 135 | S | A | -0.3910 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6853 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2598 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5643 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1912 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1590 | |
| 157 | D | A | 0.3332 | |
| 158 | L | A | 0.7826 | |
| 159 | A | A | 0.1681 | |
| 160 | E | A | -1.4544 | |
| 161 | P | A | -0.2100 | |
| 162 | C | A | 0.1877 | |
| 163 | P | A | -0.1674 | |
| 164 | G | A | -0.0766 | |
| 165 | L | A | 0.5926 | |
| 166 | P | A | -0.1155 | |
| 167 | P | A | -0.3402 | |
| 168 | G | A | -0.4490 | |
| 169 | A | A | -0.0296 | |
| 170 | C | A | 0.6550 | |
| 171 | P | A | 0.5339 | |
| 172 | P | A | 0.8538 | |
| 173 | I | A | 2.0120 | |
| 174 | Q | A | 0.8647 | |
| 175 | L | A | 1.4910 | |
| 176 | V | A | 0.8620 | |
| 177 | N | A | -0.2946 | |
| 178 | S | A | 0.0301 | |
| 179 | V | A | 0.4289 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3837 | |
| 182 | D | A | 0.0887 | |
| 183 | G | A | -0.1551 | |
| 184 | D | A | -0.5203 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0994 | |
| 190 | F | A | 0.0651 | |
| 191 | G | A | -0.1010 | |
| 192 | N | A | -0.2491 | |
| 193 | M | A | -0.0957 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3700 | |
| 197 | E | A | -2.5577 | |
| 198 | L | A | -1.2090 | |
| 199 | Q | A | -2.5484 | |
| 200 | Q | A | -3.3126 | |
| 201 | D | A | -3.5812 | |
| 202 | R | A | -3.3293 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1953 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3418 | |
| 211 | S | A | -1.8717 | |
| 212 | T | A | -1.4028 | |
| 213 | R | A | -2.0245 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1535 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3752 | |
| 220 | L | A | 0.6093 | |
| 221 | K | A | -1.1038 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8144 | |
| 224 | N | A | -1.4932 | |
| 225 | E | A | -1.2348 | |
| 226 | A | A | -0.6005 | |
| 227 | Y | A | -0.3646 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6783 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0771 | |
| 234 | F | A | 0.2597 | |
| 235 | G | A | -0.8266 | |
| 236 | R | A | -2.6266 | |
| 237 | R | A | -2.9351 | |
| 238 | E | A | -2.1978 | |
| 239 | Q | A | -0.2410 | |
| 240 | V | A | 1.4092 | |
| 241 | Y | A | 1.0963 | |
| 242 | A | A | 0.2243 | |
| 243 | R | A | -0.9305 | |
| 244 | H | A | -0.8778 | |
| 245 | F | A | 0.1676 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.4832 | |
| 249 | A | A | -1.0914 | |
| 250 | G | A | -0.8688 | |
| 251 | P | A | -0.7966 | |
| 252 | V | A | -0.4522 | |
| 253 | G | A | -0.9048 | |
| 254 | H | A | -1.1331 | |
| 255 | P | A | -0.5105 | |
| 256 | L | A | 0.4147 | |
| 257 | P | A | -0.0590 | |
| 258 | S | A | -0.1418 | |
| 259 | A | A | -0.1328 | |
| 260 | G | A | -0.6139 | |
| 261 | P | A | -0.4701 | |
| 262 | P | A | -0.3436 | |
| 263 | S | A | 0.0818 | |
| 264 | P | A | 0.3743 | |
| 265 | L | A | 1.4952 | |
| 266 | Y | A | 0.7972 | |
| 267 | T | A | 0.0944 | |
| 268 | P | A | 0.2887 | |
| 269 | P | A | 0.3121 | |
| 270 | P | A | -0.3143 | |
| 271 | P | A | -0.0141 | |
| 272 | T | A | 0.0310 | |
| 273 | S | A | 0.3430 | |
| 274 | P | A | 0.3212 | |
| 275 | Y | A | 1.6098 | |
| 276 | A | A | 1.4673 | |
| 277 | I | A | 2.4918 | |
| 278 | L | A | 1.8759 | |
| 279 | P | A | 0.3565 | |
| 280 | P | A | 0.0000 | |
| 281 | Y | A | 0.2767 | |
| 282 | D | A | -0.3508 | |
| 283 | Y | A | 1.0843 | |
| 284 | F | A | 0.7938 | |
| 285 | G | A | 0.2647 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9020 | |
| 291 | L | A | 1.6074 | |
| 292 | V | A | 0.6324 | |
| 293 | S | A | -0.1523 | |
| 294 | S | A | -0.9528 | |
| 295 | D | A | -1.8428 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1134 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6543 | |
| 301 | R | A | -1.8647 | |
| 302 | P | A | -0.9844 | |
| 303 | F | A | -0.1968 | |
| 304 | W | A | -0.5636 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0865 | |
| 307 | R | A | -2.8369 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2608 | |
| 310 | G | A | -1.2224 | |
| 311 | N | A | -1.2707 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7858 | |
| 319 | N | A | -0.8368 | |
| 320 | E | A | -1.0278 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3167 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0913 | |
| 333 | N | A | 0.5257 | |
| 334 | F | A | 1.7400 | |
| 335 | T | A | 0.8667 | |
| 336 | I | A | 0.4598 | |
| 337 | S | A | -0.8319 | |
| 338 | Q | A | -1.5114 | |
| 339 | Q | A | -0.8631 | |
| 340 | L | A | 0.7961 | |
| 341 | C | A | 0.4215 | |
| 342 | T | A | 0.1543 | |
| 343 | P | A | -0.2727 | |
| 344 | A | A | 0.1986 | |
| 345 | P | A | 0.1669 | |
| 346 | N | A | -0.2832 | |
| 347 | V | A | 1.5498 | |
| 348 | Y | A | 1.4480 | |
| 349 | D | A | 0.0581 | |
| 350 | P | A | -0.3338 | |
| 351 | S | A | -0.2653 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5606 | |
| 354 | K | A | -1.6643 | |
| 355 | N | A | -1.6957 | |
| 356 | Y | A | -0.0832 | |
| 357 | L | A | 0.6374 | |
| 358 | R | A | 0.9611 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3878 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0767 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0861 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6930 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3017 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3128 | |
| 376 | L | A | -1.7128 | |
| 377 | D | A | -1.9967 | |
| 378 | P | A | -1.0395 | |
| 379 | G | A | -1.0157 | |
| 380 | V | A | -0.9333 | |
| 381 | L | A | -0.5287 | |
| 382 | A | A | -0.6536 | |
| 383 | H | A | -0.8061 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4070 | |
| 386 | T | A | -0.5490 | |
| 387 | M | A | -0.2970 | |
| 388 | N | A | -0.8634 | |
| 389 | P | A | -1.2345 | |
| 390 | T | A | -1.4149 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4102 | |
| 393 | E | A | -2.7396 | |
| 394 | N | A | -2.2895 | |
| 395 | W | A | -1.3300 | |
| 396 | N | A | -1.0797 | |
| 397 | L | A | -0.1850 | |
| 398 | G | A | 0.5261 | |
| 399 | F | A | 2.4170 | |
| 400 | V | A | 1.8295 | |
| 401 | P | A | 0.0487 | |
| 402 | P | A | -1.8369 | |
| 403 | K | A | -3.3070 | |
| 404 | E | A | -3.7558 | |
| 405 | R | A | -3.8634 | |
| 406 | E | A | -3.7638 | |
| 407 | D | A | -2.8572 | |
| 408 | P | A | -1.7585 | |
| 409 | Y | A | -0.9862 | |
| 410 | K | A | -2.1144 | |
| 411 | G | A | -0.6360 | |
| 412 | L | A | 0.6761 | |
| 413 | I | A | 1.5948 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3668 | |
| 416 | E | A | -1.6390 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9327 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0456 | |
| 421 | E | A | -2.7804 | |
| 422 | R | A | -2.6293 | |
| 423 | F | A | -1.2755 | |
| 424 | S | A | -1.4629 | |
| 425 | Q | A | -1.8478 | |
| 426 | D | A | -2.9033 | |
| 427 | L | A | -2.0043 | |
| 428 | D | A | -2.8108 | |
| 429 | Q | A | -2.6332 | |
| 430 | F | A | -1.4429 | |
| 431 | A | A | -0.9161 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6221 | |
| 435 | K | A | -0.7361 | |
| 436 | F | A | 0.1237 | |
| 437 | L | A | 1.0127 | |
| 438 | Y | A | 0.8111 | |
| 439 | Q | A | -0.2807 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine