Project name: 7db03ef2dcf2e37

Status: done

Started: 2026-02-08 15:54:06
Settings
Chain sequence(s) L: SVYYPPDAES
input PDB
Selected Chain(s) L
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with L chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:04)
Show buried residues

Minimal score value
-1.8478
Maximal score value
1.9943
Average score
0.0916
Total score value
0.9156

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
0 S L 0.1970
1 V L 1.9943
2 Y L 1.8567
3 Y L 1.4903
4 P L -0.0194
5 P L -0.2204
6 D L -1.4519
7 A L -0.5217
8 E L -1.8478
9 S L -0.5615
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018