Project name: GLP-1

Status: done

Started: 2026-06-17 09:17:06
Settings
Chain sequence(s) A: HAEGTFTSDVSSYLEGQAAKEFIAWLVKGRG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:47)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:48)
Show buried residues

Minimal score value
-2.1171
Maximal score value
2.05
Average score
-0.1762
Total score value
-5.4607

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
98 H A -1.3967
99 A A -1.4591
100 E A -2.1171
101 G A -1.1486
102 T A -0.2066
103 F A 1.2552
104 T A 0.5194
105 S A 0.2656
106 D A -0.3320
107 V A 1.4972
108 S A 0.7539
109 S A 0.2126
110 Y A 1.1293
111 L A 0.7120
112 E A -1.3667
113 G A -0.9725
114 Q A -1.4395
115 A A -0.9906
116 A A -0.7043
117 K A -1.7065
118 E A -1.1617
119 F A 1.5421
120 I A 2.0500
121 A A 0.7941
122 W A 0.7558
123 L A 1.3094
124 V A 1.5322
125 K A -0.7562
126 G A -1.3053
127 R A -2.0661
128 G A -0.6600
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Laboratory of Theory of Biopolymers 2018