| Chain sequence(s) |
H: QVQLVESGGGLVQPGGSLRLSCAASGYSGLDISGFSLGWFRQAPGQGLEAVAAISASGKTTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAASGRGIDPSLNPSSYQYWGQGTLVTVS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:21)
[INFO] Main: Simulation completed successfully. (00:01:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.2758 | |
| 2 | V | H | -0.9438 | |
| 3 | Q | H | -1.0297 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.6038 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.3221 | |
| 8 | G | H | -0.6287 | |
| 9 | G | H | 0.1189 | |
| 10 | G | H | 0.6356 | |
| 11 | L | H | 1.3093 | |
| 12 | V | H | 0.0000 | |
| 13 | Q | H | -1.5354 | |
| 14 | P | H | -1.9741 | |
| 15 | G | H | -1.7246 | |
| 16 | G | H | -1.2207 | |
| 17 | S | H | -1.6212 | |
| 18 | L | H | -1.1211 | |
| 19 | R | H | -2.3840 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.5819 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.2033 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.7859 | |
| 26 | G | H | -0.9868 | |
| 27 | Y | H | -0.6172 | |
| 28 | S | H | -0.6279 | |
| 29 | G | H | -0.9397 | |
| 30 | L | H | -1.0837 | |
| 31 | D | H | -1.7678 | |
| 32 | I | H | 0.0000 | |
| 33 | S | H | -1.5113 | |
| 34 | G | H | -1.0695 | |
| 35 | F | H | 0.0000 | |
| 36 | S | H | 0.0000 | |
| 37 | L | H | 0.0000 | |
| 38 | G | H | 0.0000 | |
| 39 | W | H | 0.0000 | |
| 40 | F | H | 0.0000 | |
| 41 | R | H | 0.0000 | |
| 42 | Q | H | -0.6450 | |
| 43 | A | H | -0.9697 | |
| 44 | P | H | -0.9215 | |
| 45 | G | H | -1.2985 | |
| 46 | Q | H | -1.8290 | |
| 47 | G | H | -1.2024 | |
| 48 | L | H | -0.5491 | |
| 49 | E | H | -1.0066 | |
| 50 | A | H | -0.5858 | |
| 51 | V | H | 0.0000 | |
| 52 | A | H | 0.0000 | |
| 53 | A | H | 0.0000 | |
| 54 | I | H | 0.0000 | |
| 55 | S | H | -1.1863 | |
| 56 | A | H | -1.1740 | |
| 57 | S | H | -1.0836 | |
| 58 | G | H | -1.3910 | |
| 59 | K | H | -1.8854 | |
| 60 | T | H | -1.1247 | |
| 61 | T | H | -0.3693 | |
| 62 | Y | H | 0.2596 | |
| 63 | Y | H | -0.5627 | |
| 64 | A | H | -1.2264 | |
| 65 | D | H | -2.3730 | |
| 66 | S | H | -1.8383 | |
| 67 | V | H | 0.0000 | |
| 68 | K | H | -2.5575 | |
| 69 | G | H | -1.8784 | |
| 70 | R | H | -1.6730 | |
| 71 | F | H | 0.0000 | |
| 72 | T | H | -1.0826 | |
| 73 | I | H | 0.0000 | |
| 74 | S | H | -0.8038 | |
| 75 | R | H | -1.1799 | |
| 76 | D | H | -1.9139 | |
| 77 | N | H | -2.0399 | |
| 78 | S | H | -1.8521 | |
| 79 | K | H | -2.5514 | |
| 80 | N | H | -2.0087 | |
| 81 | T | H | -1.2307 | |
| 82 | L | H | 0.0000 | |
| 83 | Y | H | 0.0000 | |
| 84 | L | H | 0.0000 | |
| 85 | Q | H | -1.8039 | |
| 86 | M | H | 0.0000 | |
| 87 | N | H | -2.1704 | |
| 88 | S | H | -1.6681 | |
| 89 | L | H | 0.0000 | |
| 90 | R | H | -3.0509 | |
| 91 | A | H | -2.0991 | |
| 92 | E | H | -2.4690 | |
| 93 | D | H | 0.0000 | |
| 94 | T | H | -0.5275 | |
| 95 | A | H | 0.0000 | |
| 96 | V | H | 0.8829 | |
| 97 | Y | H | 0.0000 | |
| 98 | Y | H | 0.3182 | |
| 99 | C | H | 0.0000 | |
| 100 | A | H | 0.0000 | |
| 101 | A | H | 0.0000 | |
| 102 | S | H | 0.0000 | |
| 103 | G | H | -1.3119 | |
| 104 | R | H | -2.0941 | |
| 105 | G | H | -1.4093 | |
| 106 | I | H | -0.8611 | |
| 107 | D | H | -1.6936 | |
| 108 | P | H | 0.0000 | |
| 109 | S | H | -0.5003 | |
| 110 | L | H | -0.3734 | |
| 111 | N | H | -1.1966 | |
| 112 | P | H | -0.8475 | |
| 113 | S | H | -0.8498 | |
| 114 | S | H | -0.8424 | |
| 115 | Y | H | 0.0000 | |
| 116 | Q | H | -0.9819 | |
| 117 | Y | H | -0.3748 | |
| 118 | W | H | 0.0046 | |
| 119 | G | H | -0.1856 | |
| 120 | Q | H | -0.9296 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.6156 | |
| 123 | L | H | 1.7696 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.2510 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.9310 |