Project name: gp63_004

Status: done

Started: 2026-04-27 14:13:59
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Chain sequence(s) H: QVQLVESGGGLVQPGGSLRLSCAASGYSGLDISGFSLGWFRQAPGQGLEAVAAISASGKTTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAASGRGIDPSLNPSSYQYWGQGTLVTVS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:21)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:21)
Show buried residues

Minimal score value
-3.0509
Maximal score value
1.7696
Average score
-0.7272
Total score value
-92.3531

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.2758
2 V H -0.9438
3 Q H -1.0297
4 L H 0.0000
5 V H 0.6038
6 E H 0.0000
7 S H -0.3221
8 G H -0.6287
9 G H 0.1189
10 G H 0.6356
11 L H 1.3093
12 V H 0.0000
13 Q H -1.5354
14 P H -1.9741
15 G H -1.7246
16 G H -1.2207
17 S H -1.6212
18 L H -1.1211
19 R H -2.3840
20 L H 0.0000
21 S H -0.5819
22 C H 0.0000
23 A H -0.2033
24 A H 0.0000
25 S H -0.7859
26 G H -0.9868
27 Y H -0.6172
28 S H -0.6279
29 G H -0.9397
30 L H -1.0837
31 D H -1.7678
32 I H 0.0000
33 S H -1.5113
34 G H -1.0695
35 F H 0.0000
36 S H 0.0000
37 L H 0.0000
38 G H 0.0000
39 W H 0.0000
40 F H 0.0000
41 R H 0.0000
42 Q H -0.6450
43 A H -0.9697
44 P H -0.9215
45 G H -1.2985
46 Q H -1.8290
47 G H -1.2024
48 L H -0.5491
49 E H -1.0066
50 A H -0.5858
51 V H 0.0000
52 A H 0.0000
53 A H 0.0000
54 I H 0.0000
55 S H -1.1863
56 A H -1.1740
57 S H -1.0836
58 G H -1.3910
59 K H -1.8854
60 T H -1.1247
61 T H -0.3693
62 Y H 0.2596
63 Y H -0.5627
64 A H -1.2264
65 D H -2.3730
66 S H -1.8383
67 V H 0.0000
68 K H -2.5575
69 G H -1.8784
70 R H -1.6730
71 F H 0.0000
72 T H -1.0826
73 I H 0.0000
74 S H -0.8038
75 R H -1.1799
76 D H -1.9139
77 N H -2.0399
78 S H -1.8521
79 K H -2.5514
80 N H -2.0087
81 T H -1.2307
82 L H 0.0000
83 Y H 0.0000
84 L H 0.0000
85 Q H -1.8039
86 M H 0.0000
87 N H -2.1704
88 S H -1.6681
89 L H 0.0000
90 R H -3.0509
91 A H -2.0991
92 E H -2.4690
93 D H 0.0000
94 T H -0.5275
95 A H 0.0000
96 V H 0.8829
97 Y H 0.0000
98 Y H 0.3182
99 C H 0.0000
100 A H 0.0000
101 A H 0.0000
102 S H 0.0000
103 G H -1.3119
104 R H -2.0941
105 G H -1.4093
106 I H -0.8611
107 D H -1.6936
108 P H 0.0000
109 S H -0.5003
110 L H -0.3734
111 N H -1.1966
112 P H -0.8475
113 S H -0.8498
114 S H -0.8424
115 Y H 0.0000
116 Q H -0.9819
117 Y H -0.3748
118 W H 0.0046
119 G H -0.1856
120 Q H -0.9296
121 G H 0.0000
122 T H 0.6156
123 L H 1.7696
124 V H 0.0000
125 T H 0.2510
126 V H 0.0000
127 S H -0.9310
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Laboratory of Theory of Biopolymers 2018