| Chain sequence(s) |
A: EVQLVESGGGVVQPGGSLRLSCAASGVTLDYYAIGWFRQAPGKGLEGVSCISSDGSTFYEDSDEGRFTISRDNAKNTVYLQMNNLKPEDTAVYYCAAVRLKCVTVTYSSGRYYVYDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:04)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:04)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:04)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:04)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:05)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:37)
[INFO] Main: Simulation completed successfully. (00:02:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.1119 | |
| 2 | V | A | -1.4723 | |
| 3 | Q | A | -1.3008 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.8966 | |
| 6 | E | A | 0.4081 | |
| 7 | S | A | -0.2930 | |
| 8 | G | A | -0.8411 | |
| 9 | G | A | 0.1612 | |
| 10 | G | A | 0.7684 | |
| 11 | V | A | 1.6734 | |
| 12 | V | A | 0.1003 | |
| 13 | Q | A | -1.3983 | |
| 14 | P | A | -1.7574 | |
| 15 | G | A | -1.8281 | |
| 16 | G | A | -1.2521 | |
| 17 | S | A | -1.5524 | |
| 18 | L | A | -1.0374 | |
| 19 | R | A | -2.1465 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4453 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.2082 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.7719 | |
| 26 | G | A | -1.1752 | |
| 27 | V | A | -0.2948 | |
| 28 | T | A | -0.3757 | |
| 29 | L | A | 0.0000 | |
| 30 | D | A | -1.0658 | |
| 31 | Y | A | 0.3346 | |
| 32 | Y | A | 0.0000 | |
| 33 | A | A | 0.0000 | |
| 34 | I | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -0.8620 | |
| 40 | A | A | -1.1712 | |
| 41 | P | A | -1.1144 | |
| 42 | G | A | -1.5095 | |
| 43 | K | A | -2.3637 | |
| 44 | G | A | -1.4934 | |
| 45 | L | A | -0.3921 | |
| 46 | E | A | -1.2527 | |
| 47 | G | A | 0.0000 | |
| 48 | V | A | 0.0000 | |
| 49 | S | A | 0.0000 | |
| 50 | C | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | S | A | 0.0000 | |
| 53 | S | A | -1.2614 | |
| 54 | D | A | -1.9980 | |
| 55 | G | A | -1.4182 | |
| 56 | S | A | -0.6549 | |
| 57 | T | A | 0.3603 | |
| 58 | F | A | 1.3686 | |
| 59 | Y | A | -0.1304 | |
| 60 | E | A | -1.3427 | |
| 61 | D | A | -2.4195 | |
| 62 | S | A | -1.7402 | |
| 63 | D | A | 0.0000 | |
| 64 | E | A | -2.5590 | |
| 65 | G | A | -1.9856 | |
| 66 | R | A | -1.7183 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -0.6851 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.5615 | |
| 71 | R | A | -1.3151 | |
| 72 | D | A | -1.9968 | |
| 73 | N | A | -2.0330 | |
| 74 | A | A | -1.5634 | |
| 75 | K | A | -2.2948 | |
| 76 | N | A | -1.7521 | |
| 77 | T | A | 0.0000 | |
| 78 | V | A | 0.0000 | |
| 79 | Y | A | -0.7167 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.2706 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.9773 | |
| 84 | N | A | -2.3344 | |
| 85 | L | A | 0.0000 | |
| 86 | K | A | -2.4643 | |
| 87 | P | A | -1.8539 | |
| 88 | E | A | -2.2787 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -0.3724 | |
| 91 | A | A | 0.0000 | |
| 92 | V | A | 0.9471 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | 0.3941 | |
| 95 | C | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | V | A | 0.0000 | |
| 99 | R | A | -1.3430 | |
| 100 | L | A | -0.1235 | |
| 101 | K | A | -1.4731 | |
| 102 | C | A | -0.0547 | |
| 103 | V | A | 0.5311 | |
| 104 | T | A | 0.6456 | |
| 105 | V | A | 1.0124 | |
| 106 | T | A | 0.3103 | |
| 107 | Y | A | 0.9169 | |
| 108 | S | A | -0.0169 | |
| 109 | S | A | -0.1515 | |
| 110 | G | A | -0.4003 | |
| 111 | R | A | -0.7563 | |
| 112 | Y | A | 1.1556 | |
| 113 | Y | A | 1.0265 | |
| 114 | V | A | 1.0908 | |
| 115 | Y | A | 0.0000 | |
| 116 | D | A | -1.4507 | |
| 117 | Y | A | -0.6990 | |
| 118 | W | A | 0.0927 | |
| 119 | G | A | -0.0195 | |
| 120 | Q | A | -0.8168 | |
| 121 | G | A | 0.0000 | |
| 122 | T | A | 0.6609 | |
| 123 | L | A | 1.8013 | |
| 124 | V | A | 0.0000 | |
| 125 | T | A | 0.4772 | |
| 126 | V | A | 0.0000 | |
| 127 | S | A | -0.6407 | |
| 128 | S | A | -0.4672 |