| Chain sequence(s) |
F: ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ
input PDB |
| Selected Chain(s) | F |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with F chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:17)
[INFO] Main: Simulation completed successfully. (00:01:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 3 | K | F | -1.4395 | |
| 4 | A | F | 0.0000 | |
| 5 | V | F | 1.2173 | |
| 6 | C | F | 0.0000 | |
| 7 | V | F | 1.3820 | |
| 8 | L | F | 0.0000 | |
| 9 | K | F | -1.5790 | |
| 15 | Q | F | -1.8842 | |
| 16 | G | F | -0.5660 | |
| 17 | I | F | 1.1732 | |
| 18 | I | F | 0.0000 | |
| 19 | N | F | 0.1063 | |
| 20 | F | F | 0.0000 | |
| 21 | E | F | -1.7776 | |
| 22 | Q | F | -2.4560 | |
| 23 | K | F | -3.2674 | |
| 24 | E | F | -3.3157 | |
| 25 | S | F | -2.1195 | |
| 26 | N | F | -2.3757 | |
| 27 | G | F | -2.0169 | |
| 28 | P | F | -1.2996 | |
| 29 | V | F | 0.0000 | |
| 31 | V | F | 0.0000 | |
| 32 | W | F | 0.7290 | |
| 33 | G | F | 0.5648 | |
| 34 | S | F | -0.2382 | |
| 35 | I | F | 0.0000 | |
| 36 | K | F | -2.5403 | |
| 37 | G | F | -1.9316 | |
| 38 | L | F | 0.0000 | |
| 39 | T | F | -2.2561 | |
| 40 | E | F | -3.2357 | |
| 41 | G | F | -1.1970 | |
| 42 | L | F | 0.1061 | |
| 43 | H | F | 0.0000 | |
| 44 | G | F | 0.0000 | |
| 45 | F | F | 0.0000 | |
| 46 | H | F | 0.0000 | |
| 47 | V | F | 0.0000 | |
| 48 | H | F | 0.0000 | |
| 49 | E | F | -0.5453 | |
| 50 | F | F | 0.3944 | |
| 51 | G | F | -0.2164 | |
| 52 | D | F | -1.2157 | |
| 54 | T | F | -0.6742 | |
| 55 | A | F | -0.4646 | |
| 56 | G | F | -0.8531 | |
| 57 | C | F | -0.3767 | |
| 58 | T | F | -0.4220 | |
| 59 | S | F | -0.5478 | |
| 60 | A | F | 0.0000 | |
| 61 | G | F | -0.3166 | |
| 62 | P | F | -0.5707 | |
| 63 | H | F | 0.0000 | |
| 64 | F | F | 0.0000 | |
| 65 | N | F | -1.0710 | |
| 66 | P | F | -0.2786 | |
| 67 | L | F | 0.3939 | |
| 69 | R | F | -2.7624 | |
| 70 | K | F | -3.1703 | |
| 71 | H | F | 0.0000 | |
| 72 | G | F | 0.0000 | |
| 73 | G | F | 0.0000 | |
| 74 | P | F | -1.4772 | |
| 75 | K | F | -2.8094 | |
| 76 | D | F | -3.1802 | |
| 77 | E | F | -3.2671 | |
| 79 | R | F | 0.0000 | |
| 80 | H | F | 0.0000 | |
| 81 | V | F | 0.0000 | |
| 82 | G | F | 0.0000 | |
| 83 | D | F | 0.0000 | |
| 84 | L | F | 0.0000 | |
| 85 | G | F | 0.0000 | |
| 86 | N | F | 0.1441 | |
| 87 | V | F | 0.0000 | |
| 88 | T | F | -0.5458 | |
| 89 | A | F | 0.0000 | |
| 90 | D | F | -3.6796 | |
| 91 | K | F | -3.9599 | |
| 92 | D | F | -3.7525 | |
| 93 | G | F | 0.0000 | |
| 94 | V | F | -2.3428 | |
| 95 | A | F | -1.3140 | |
| 97 | V | F | 0.5853 | |
| 98 | S | F | 0.4742 | |
| 99 | I | F | 0.8134 | |
| 101 | D | F | -0.3988 | |
| 102 | S | F | -0.6247 | |
| 103 | V | F | -0.2995 | |
| 104 | I | F | 0.0000 | |
| 105 | S | F | -0.5516 | |
| 106 | L | F | -0.1448 | |
| 110 | H | F | -0.6422 | |
| 112 | I | F | 0.0000 | |
| 113 | I | F | 0.8959 | |
| 114 | G | F | 0.3960 | |
| 115 | R | F | -0.1039 | |
| 116 | T | F | 0.0000 | |
| 117 | L | F | 0.0000 | |
| 118 | V | F | 0.0000 | |
| 119 | V | F | 0.0000 | |
| 120 | H | F | 0.0000 | |
| 121 | E | F | -1.8738 | |
| 123 | A | F | -0.4649 | |
| 124 | D | F | 0.0000 | |
| 125 | D | F | -1.0634 | |
| 126 | L | F | -0.7952 | |
| 127 | G | F | -1.6515 | |
| 129 | G | F | -1.3820 | |
| 130 | G | F | -1.2560 | |
| 132 | E | F | -2.5399 | |
| 134 | S | F | 0.0000 | |
| 135 | T | F | -2.5476 | |
| 136 | K | F | -3.0008 | |
| 137 | T | F | -1.9240 | |
| 138 | G | F | 0.0000 | |
| 139 | N | F | -2.3675 | |
| 140 | A | F | 0.0000 | |
| 141 | G | F | -1.5271 | |
| 142 | S | F | -1.1847 | |
| 143 | R | F | -0.7116 | |
| 144 | L | F | -0.3954 | |
| 145 | A | F | 0.0000 | |
| 146 | C | F | -0.1161 | |
| 147 | G | F | 0.3126 | |
| 148 | V | F | 1.5818 | |
| 149 | I | F | 0.0000 | |
| 150 | G | F | 1.2442 | |
| 151 | I | F | 1.7822 | |
| 152 | A | F | -0.0649 | |
| 153 | Q | F | -1.0170 |