Project name: aaaw

Status: done

Started: 2025-07-25 02:46:05
Settings
Chain sequence(s) A: LHDVLLVMQYFEKLQSRLTTQMMQALDFGKQHLNSCGRQGTGQIRKDGNQGSGIGRDAYRLRQKHSTR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:15)
Show buried residues

Minimal score value
-3.3751
Maximal score value
1.9725
Average score
-0.9723
Total score value
-66.1157

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 1.3456
2 H A -0.0792
3 D A -0.3158
4 V A 1.3767
5 L A 1.1278
6 L A 1.1460
7 V A 1.6158
8 M A 1.4114
9 Q A 0.0000
10 Y A 1.8400
11 F A 1.9725
12 E A 0.0000
13 K A -0.3243
14 L A 0.7296
15 Q A 0.2306
16 S A 0.0000
17 R A -1.2713
18 L A 0.5463
19 T A 0.0232
20 T A -0.1937
21 Q A -0.1366
22 M A -0.5733
23 M A 0.5833
24 Q A -0.2304
25 A A 0.0000
26 L A -0.5152
27 D A -1.1256
28 F A -0.0280
29 G A -0.4675
30 K A -1.5613
31 Q A -1.9296
32 H A -1.2486
33 L A -1.2863
34 N A -2.3254
35 S A -1.9677
36 C A -1.3656
37 G A -2.0763
38 R A -3.0138
39 Q A -2.7993
40 G A -2.1561
41 T A -1.3839
42 G A -1.2103
43 Q A -1.6943
44 I A -0.6363
45 R A -2.9909
46 K A -3.3751
47 D A -2.4473
48 G A -2.7575
49 N A -3.2231
50 Q A -2.8056
51 G A -2.0593
52 S A -2.1985
53 G A -1.7005
54 I A 0.0000
55 G A -1.3273
56 R A -2.0734
57 D A -1.4331
58 A A 0.0000
59 Y A -1.0668
60 R A -2.5963
61 L A -1.9752
62 R A -2.0833
63 Q A -2.7854
64 K A -3.1210
65 H A 0.0000
66 S A -1.6387
67 T A -2.0264
68 R A -2.4641
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Laboratory of Theory of Biopolymers 2018