| Chain sequence(s) |
A: MARTKQTARKSTGGKAPRKQLATKVWTLSLSLSLSHVCLICVGYANTL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.6130 | |
| 2 | A | A | -0.5697 | |
| 3 | R | A | -2.2348 | |
| 4 | T | A | -2.0175 | |
| 5 | K | A | -2.8341 | |
| 6 | Q | A | -2.6379 | |
| 7 | T | A | -1.9274 | |
| 8 | A | A | -2.0224 | |
| 9 | R | A | -2.9342 | |
| 10 | K | A | -2.7981 | |
| 11 | S | A | -1.8619 | |
| 12 | T | A | -1.5529 | |
| 13 | G | A | -1.5661 | |
| 14 | G | A | -1.5949 | |
| 15 | K | A | -2.4168 | |
| 16 | A | A | -1.9414 | |
| 17 | P | A | -2.2932 | |
| 18 | R | A | -2.9481 | |
| 19 | K | A | -3.0051 | |
| 20 | Q | A | -1.9925 | |
| 21 | L | A | -0.0809 | |
| 22 | A | A | -0.1440 | |
| 23 | T | A | -0.3617 | |
| 24 | K | A | -0.1891 | |
| 25 | V | A | 2.1558 | |
| 26 | W | A | 2.1704 | |
| 27 | T | A | 1.4908 | |
| 28 | L | A | 2.1970 | |
| 29 | S | A | 1.9766 | |
| 30 | L | A | 1.9846 | |
| 31 | S | A | 2.0849 | |
| 32 | L | A | 2.4685 | |
| 33 | S | A | 1.9874 | |
| 34 | L | A | 2.8995 | |
| 35 | S | A | 2.0382 | |
| 36 | H | A | 1.9324 | |
| 37 | V | A | 3.4380 | |
| 38 | C | A | 3.5558 | |
| 39 | L | A | 3.5518 | |
| 40 | I | A | 3.1662 | |
| 41 | C | A | 3.1690 | |
| 42 | V | A | 3.1950 | |
| 43 | G | A | 2.2264 | |
| 44 | Y | A | 2.4860 | |
| 45 | A | A | 1.5635 | |
| 46 | N | A | 0.1708 | |
| 47 | T | A | 0.8037 | |
| 48 | L | A | 1.4327 |