| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFRDIVVDGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTAPVHPGADMRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRNGPDGVPLPSAPPPSPLYVPPPPTSPYAVPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPLPNVYNPKNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9438 | |
| 2 | L | A | 1.9673 | |
| 3 | P | A | 0.6328 | |
| 4 | P | A | 0.3156 | |
| 5 | T | A | 0.0886 | |
| 6 | T | A | -0.0277 | |
| 7 | P | A | 0.2384 | |
| 8 | V | A | 1.2143 | |
| 9 | A | A | 0.0551 | |
| 10 | K | A | -1.0027 | |
| 11 | V | A | -0.1839 | |
| 12 | Q | A | -1.4103 | |
| 13 | S | A | -1.5452 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3921 | |
| 16 | E | A | -2.4252 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4633 | |
| 20 | P | A | 0.1109 | |
| 21 | T | A | 0.1297 | |
| 22 | S | A | -0.1715 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1109 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.3187 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9088 | |
| 31 | R | A | -2.6883 | |
| 32 | L | A | -0.8068 | |
| 33 | L | A | 1.1554 | |
| 34 | T | A | 1.3682 | |
| 35 | V | A | 1.8438 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.0000 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.7210 | |
| 40 | R | A | -1.7771 | |
| 41 | D | A | -0.6853 | |
| 42 | I | A | 1.3123 | |
| 43 | V | A | 2.1607 | |
| 44 | V | A | 1.4808 | |
| 45 | D | A | -1.0233 | |
| 46 | G | A | -0.5974 | |
| 47 | K | A | -0.2601 | |
| 48 | V | A | 1.9495 | |
| 49 | L | A | 2.4948 | |
| 50 | V | A | 1.4768 | |
| 51 | P | A | 0.3502 | |
| 52 | K | A | -0.6823 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1737 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4135 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2757 | |
| 70 | K | A | -1.7963 | |
| 71 | F | A | -0.6473 | |
| 72 | A | A | -0.5758 | |
| 73 | L | A | -0.8771 | |
| 74 | P | A | -1.2830 | |
| 75 | Q | A | -2.5004 | |
| 76 | K | A | -3.1045 | |
| 77 | D | A | -2.9883 | |
| 78 | F | A | -1.6621 | |
| 79 | Y | A | -1.8834 | |
| 80 | D | A | -2.6762 | |
| 81 | P | A | -2.2955 | |
| 82 | E | A | -3.0381 | |
| 83 | K | A | -3.3878 | |
| 84 | E | A | -2.4499 | |
| 85 | R | A | -1.2820 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6422 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9792 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3601 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6926 | |
| 99 | G | A | -0.5280 | |
| 100 | P | A | -0.3775 | |
| 101 | L | A | 0.1001 | |
| 102 | G | A | -0.1700 | |
| 103 | K | A | -0.5845 | |
| 104 | G | A | -0.4652 | |
| 105 | S | A | -0.5052 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.0756 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3883 | |
| 110 | L | A | 0.4125 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0232 | |
| 113 | K | A | -0.3823 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -0.7169 | |
| 116 | D | A | -1.2325 | |
| 117 | T | A | -0.8360 | |
| 118 | E | A | -1.6786 | |
| 119 | N | A | -1.9409 | |
| 120 | P | A | -1.3521 | |
| 121 | T | A | -0.6927 | |
| 122 | A | A | -0.4541 | |
| 123 | P | A | -0.2917 | |
| 124 | V | A | -0.4600 | |
| 125 | H | A | -0.5915 | |
| 126 | P | A | -0.8673 | |
| 127 | G | A | -1.0673 | |
| 128 | A | A | -1.0005 | |
| 129 | D | A | -1.7838 | |
| 130 | M | A | -0.9230 | |
| 131 | R | A | -0.7027 | |
| 132 | V | A | 0.4403 | |
| 133 | A | A | 0.4429 | |
| 134 | F | A | 0.2821 | |
| 135 | S | A | -0.1055 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.4681 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.2399 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5616 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2066 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1697 | |
| 157 | D | A | 0.3419 | |
| 158 | L | A | 0.8088 | |
| 159 | A | A | 0.1737 | |
| 160 | E | A | -1.4471 | |
| 161 | P | A | -0.2060 | |
| 162 | C | A | 0.1874 | |
| 163 | P | A | -0.1758 | |
| 164 | G | A | -0.0930 | |
| 165 | L | A | 0.5594 | |
| 166 | P | A | -0.1356 | |
| 167 | P | A | -0.3498 | |
| 168 | G | A | -0.4341 | |
| 169 | A | A | 0.2894 | |
| 170 | C | A | 1.0158 | |
| 171 | P | A | 0.5235 | |
| 172 | P | A | 0.8468 | |
| 173 | I | A | 1.9990 | |
| 174 | Q | A | 0.8686 | |
| 175 | L | A | 1.4896 | |
| 176 | V | A | 0.8685 | |
| 177 | N | A | -0.3170 | |
| 178 | S | A | 0.0080 | |
| 179 | V | A | 0.3890 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3786 | |
| 182 | D | A | 0.0772 | |
| 183 | G | A | -0.1526 | |
| 184 | D | A | -0.5385 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0789 | |
| 190 | F | A | 0.0362 | |
| 191 | G | A | -0.1056 | |
| 192 | N | A | -0.2577 | |
| 193 | M | A | -0.1208 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4301 | |
| 197 | E | A | -2.6446 | |
| 198 | L | A | -1.2509 | |
| 199 | Q | A | -2.5784 | |
| 200 | Q | A | -3.3336 | |
| 201 | D | A | -3.5957 | |
| 202 | R | A | -3.3797 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | -0.0375 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.4391 | |
| 211 | S | A | -1.9609 | |
| 212 | T | A | -1.4757 | |
| 213 | R | A | -2.0949 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1420 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3413 | |
| 220 | L | A | 0.5522 | |
| 221 | K | A | -1.2209 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8514 | |
| 224 | N | A | -1.6120 | |
| 225 | E | A | -1.2555 | |
| 226 | A | A | -0.6043 | |
| 227 | Y | A | -0.3691 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6975 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0754 | |
| 234 | F | A | 0.2686 | |
| 235 | G | A | -0.8235 | |
| 236 | R | A | -2.4781 | |
| 237 | R | A | -2.6092 | |
| 238 | E | A | -1.5628 | |
| 239 | Q | A | 0.0971 | |
| 240 | V | A | 1.6133 | |
| 241 | Y | A | 1.2646 | |
| 242 | A | A | 0.4237 | |
| 243 | R | A | -0.5292 | |
| 244 | H | A | -0.7147 | |
| 245 | F | A | 0.1872 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.8142 | |
| 249 | N | A | -1.2001 | |
| 250 | G | A | -1.0014 | |
| 251 | P | A | -0.6487 | |
| 252 | D | A | -0.3947 | |
| 253 | G | A | 0.0852 | |
| 254 | V | A | 1.3312 | |
| 255 | P | A | 0.3573 | |
| 256 | L | A | 0.8441 | |
| 257 | P | A | 0.3540 | |
| 258 | S | A | -0.1326 | |
| 259 | A | A | 0.1654 | |
| 260 | P | A | -0.3509 | |
| 261 | P | A | -0.0323 | |
| 262 | P | A | 0.0714 | |
| 263 | S | A | 0.6113 | |
| 264 | P | A | 0.7036 | |
| 265 | L | A | 1.9047 | |
| 266 | Y | A | 1.8178 | |
| 267 | V | A | 1.9737 | |
| 268 | P | A | 1.0666 | |
| 269 | P | A | 0.5806 | |
| 270 | P | A | -0.1626 | |
| 271 | P | A | -0.0905 | |
| 272 | T | A | -0.0405 | |
| 273 | S | A | 0.1925 | |
| 274 | P | A | 0.2843 | |
| 275 | Y | A | 1.1184 | |
| 276 | A | A | 0.9872 | |
| 277 | V | A | 1.7850 | |
| 278 | P | A | 0.9288 | |
| 279 | P | A | -0.0193 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.1752 | |
| 282 | D | A | -0.7423 | |
| 283 | Y | A | 0.7641 | |
| 284 | F | A | 0.6825 | |
| 285 | G | A | 0.3635 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9808 | |
| 291 | L | A | 1.6378 | |
| 292 | V | A | 0.6570 | |
| 293 | S | A | -0.1496 | |
| 294 | S | A | -0.9533 | |
| 295 | D | A | -1.8436 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1160 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6359 | |
| 301 | R | A | -1.8658 | |
| 302 | P | A | -0.9794 | |
| 303 | F | A | -0.1895 | |
| 304 | W | A | -0.5592 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0788 | |
| 307 | R | A | -2.8299 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.3893 | |
| 310 | G | A | -1.2263 | |
| 311 | N | A | -1.2652 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8291 | |
| 319 | N | A | -0.9488 | |
| 320 | E | A | -1.0451 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3153 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0757 | |
| 333 | N | A | 0.5837 | |
| 334 | F | A | 1.8176 | |
| 335 | T | A | 0.9535 | |
| 336 | I | A | 0.4969 | |
| 337 | S | A | -0.9249 | |
| 338 | Q | A | -1.6956 | |
| 339 | Q | A | -1.1037 | |
| 340 | L | A | 0.1566 | |
| 341 | S | A | 0.4280 | |
| 342 | T | A | 0.3532 | |
| 343 | P | A | 0.3051 | |
| 344 | L | A | 1.4797 | |
| 345 | P | A | 0.7346 | |
| 346 | N | A | 0.1132 | |
| 347 | V | A | 1.7758 | |
| 348 | Y | A | 1.4514 | |
| 349 | N | A | -0.3936 | |
| 350 | P | A | -1.3051 | |
| 351 | K | A | -2.0077 | |
| 352 | N | A | -0.8708 | |
| 353 | F | A | -1.3302 | |
| 354 | K | A | -2.3304 | |
| 355 | N | A | -1.7129 | |
| 356 | Y | A | 0.1170 | |
| 357 | L | A | 0.8015 | |
| 358 | R | A | 1.0720 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3991 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0840 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0637 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6954 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3023 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3121 | |
| 376 | L | A | -1.7110 | |
| 377 | D | A | -1.9962 | |
| 378 | P | A | -1.0385 | |
| 379 | G | A | -1.0123 | |
| 380 | V | A | -0.9336 | |
| 381 | L | A | -0.5295 | |
| 382 | A | A | -0.6525 | |
| 383 | H | A | -0.8109 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3978 | |
| 386 | T | A | -0.5395 | |
| 387 | M | A | -0.2939 | |
| 388 | N | A | -0.8578 | |
| 389 | P | A | -1.2397 | |
| 390 | T | A | -1.4427 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4387 | |
| 393 | E | A | -2.7810 | |
| 394 | N | A | -2.3946 | |
| 395 | W | A | -1.3836 | |
| 396 | N | A | -1.1295 | |
| 397 | L | A | -0.1820 | |
| 398 | G | A | 0.5464 | |
| 399 | F | A | 2.4127 | |
| 400 | V | A | 1.8159 | |
| 401 | P | A | 0.0485 | |
| 402 | P | A | -1.8335 | |
| 403 | K | A | -3.3168 | |
| 404 | E | A | -3.7705 | |
| 405 | R | A | -3.9019 | |
| 406 | E | A | -3.7855 | |
| 407 | D | A | -2.8867 | |
| 408 | P | A | -1.7729 | |
| 409 | Y | A | -0.9948 | |
| 410 | K | A | -2.1199 | |
| 411 | G | A | -0.6415 | |
| 412 | L | A | 0.6707 | |
| 413 | I | A | 1.5831 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4039 | |
| 416 | E | A | -1.7104 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9687 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0815 | |
| 421 | E | A | -2.8160 | |
| 422 | R | A | -2.7018 | |
| 423 | F | A | -1.3173 | |
| 424 | S | A | -1.5010 | |
| 425 | Q | A | -1.9429 | |
| 426 | D | A | -2.9130 | |
| 427 | L | A | -1.9905 | |
| 428 | D | A | -2.7679 | |
| 429 | Q | A | -2.6195 | |
| 430 | F | A | -1.4192 | |
| 431 | A | A | -0.8857 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5388 | |
| 435 | K | A | -0.6840 | |
| 436 | F | A | 0.1630 | |
| 437 | L | A | 1.0443 | |
| 438 | Y | A | 0.8410 | |
| 439 | Q | A | -0.2671 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine