| Chain sequence(s) |
A: FSQQIYGVVYGNVTFHVPSNVPLKECLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSCSLTIYNLTSSDEDEYEMESPNITDTMKFFLYVLESLPSPTLTCALTNGSIEVQCMIPEHYNSHRGLIMYSWDCPMEQCKRNSTSIYFKMENDLPQKIQCTLSNPLFNTTSSIILTTCIPSSGHSRHR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:52)
[INFO] Main: Simulation completed successfully. (00:01:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 1.3261 | |
| 2 | S | A | 0.0964 | |
| 3 | Q | A | -0.7170 | |
| 4 | Q | A | -0.7498 | |
| 5 | I | A | -0.1356 | |
| 6 | Y | A | 0.3745 | |
| 7 | G | A | 0.0000 | |
| 8 | V | A | 0.3232 | |
| 9 | V | A | 0.2605 | |
| 10 | Y | A | 0.6565 | |
| 11 | G | A | -0.2123 | |
| 12 | N | A | -0.9974 | |
| 13 | V | A | 0.0000 | |
| 14 | T | A | -0.2594 | |
| 15 | F | A | 0.0000 | |
| 16 | H | A | -1.1112 | |
| 17 | V | A | 0.0000 | |
| 18 | P | A | -0.6486 | |
| 19 | S | A | -0.2927 | |
| 20 | N | A | -0.5689 | |
| 21 | V | A | 0.5520 | |
| 22 | P | A | 0.0585 | |
| 23 | L | A | 0.0000 | |
| 24 | K | A | -2.3464 | |
| 25 | E | A | -2.5308 | |
| 26 | C | A | 0.0000 | |
| 27 | L | A | -0.6184 | |
| 28 | W | A | 0.0000 | |
| 29 | K | A | -2.3734 | |
| 30 | K | A | -2.6502 | |
| 31 | Q | A | -3.1811 | |
| 32 | K | A | -3.5963 | |
| 33 | D | A | -3.5265 | |
| 34 | K | A | -2.4646 | |
| 35 | V | A | 0.0000 | |
| 36 | A | A | 0.0000 | |
| 37 | E | A | 0.0000 | |
| 38 | L | A | 0.0000 | |
| 39 | E | A | -2.7293 | |
| 40 | N | A | -2.7825 | |
| 41 | S | A | -2.3468 | |
| 42 | E | A | -2.4201 | |
| 43 | F | A | -0.6671 | |
| 44 | R | A | -1.1307 | |
| 45 | A | A | -0.8670 | |
| 46 | F | A | -1.1498 | |
| 47 | S | A | -0.9602 | |
| 48 | S | A | -0.9580 | |
| 49 | F | A | 0.0000 | |
| 50 | K | A | -2.3399 | |
| 51 | N | A | -2.0173 | |
| 52 | R | A | -1.2892 | |
| 53 | V | A | -0.3235 | |
| 54 | Y | A | 0.9596 | |
| 55 | L | A | 0.0000 | |
| 56 | D | A | 0.3769 | |
| 57 | T | A | 0.2070 | |
| 58 | V | A | 1.1409 | |
| 59 | S | A | 0.1795 | |
| 60 | C | A | 0.0000 | |
| 61 | S | A | -0.1521 | |
| 62 | L | A | 0.0000 | |
| 63 | T | A | 0.0746 | |
| 64 | I | A | 0.0000 | |
| 65 | Y | A | -0.3572 | |
| 66 | N | A | -0.9014 | |
| 67 | L | A | 0.0000 | |
| 68 | T | A | -0.3070 | |
| 69 | S | A | -0.3702 | |
| 70 | S | A | -0.5232 | |
| 71 | D | A | 0.0000 | |
| 72 | E | A | -0.7805 | |
| 73 | D | A | -1.0656 | |
| 74 | E | A | -1.6558 | |
| 75 | Y | A | 0.0000 | |
| 76 | E | A | -1.5946 | |
| 77 | M | A | 0.0000 | |
| 78 | E | A | -1.2824 | |
| 79 | S | A | -1.3583 | |
| 80 | P | A | -1.1899 | |
| 81 | N | A | -1.1399 | |
| 82 | I | A | -0.4449 | |
| 83 | T | A | -0.9747 | |
| 84 | D | A | -1.7423 | |
| 85 | T | A | -0.9811 | |
| 86 | M | A | -0.6395 | |
| 87 | K | A | -0.8737 | |
| 88 | F | A | 0.0000 | |
| 89 | F | A | -0.4721 | |
| 90 | L | A | 0.0000 | |
| 91 | Y | A | -0.1050 | |
| 92 | V | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.7663 | |
| 95 | S | A | -0.4975 | |
| 96 | L | A | 0.0000 | |
| 97 | P | A | -0.4267 | |
| 98 | S | A | -0.3961 | |
| 99 | P | A | 0.0000 | |
| 100 | T | A | -0.0781 | |
| 101 | L | A | 0.1509 | |
| 102 | T | A | 0.0658 | |
| 103 | C | A | 0.3933 | |
| 104 | A | A | 0.2544 | |
| 105 | L | A | 0.2334 | |
| 106 | T | A | -0.4987 | |
| 107 | N | A | -1.5275 | |
| 108 | G | A | -1.5089 | |
| 109 | S | A | 0.0000 | |
| 110 | I | A | 0.0000 | |
| 111 | E | A | -0.2754 | |
| 112 | V | A | 0.0000 | |
| 113 | Q | A | -0.1896 | |
| 114 | C | A | 0.0000 | |
| 115 | M | A | 0.1339 | |
| 116 | I | A | -0.5215 | |
| 117 | P | A | -1.2157 | |
| 118 | E | A | -2.4570 | |
| 119 | H | A | -2.1787 | |
| 120 | Y | A | 0.0000 | |
| 121 | N | A | -2.3282 | |
| 122 | S | A | -1.4078 | |
| 123 | H | A | -1.0494 | |
| 124 | R | A | -1.1148 | |
| 125 | G | A | -0.6604 | |
| 126 | L | A | 0.1193 | |
| 127 | I | A | 0.3642 | |
| 128 | M | A | 0.6435 | |
| 129 | Y | A | -0.0585 | |
| 130 | S | A | -1.2927 | |
| 131 | W | A | 0.0000 | |
| 132 | D | A | -2.4836 | |
| 133 | C | A | -1.8879 | |
| 134 | P | A | -1.2279 | |
| 135 | M | A | -1.5786 | |
| 136 | E | A | -2.6785 | |
| 137 | Q | A | -2.2026 | |
| 138 | C | A | 0.0000 | |
| 139 | K | A | -3.6032 | |
| 140 | R | A | -3.2017 | |
| 141 | N | A | -2.1439 | |
| 142 | S | A | -1.2647 | |
| 143 | T | A | -0.3755 | |
| 144 | S | A | -0.4047 | |
| 145 | I | A | 0.0000 | |
| 146 | Y | A | 0.3810 | |
| 147 | F | A | 0.0000 | |
| 148 | K | A | -2.4498 | |
| 149 | M | A | -1.8596 | |
| 150 | E | A | -3.1102 | |
| 151 | N | A | -3.2092 | |
| 152 | D | A | -2.8748 | |
| 153 | L | A | -1.6644 | |
| 154 | P | A | -1.2681 | |
| 155 | Q | A | -1.6818 | |
| 156 | K | A | -1.8272 | |
| 157 | I | A | 0.0000 | |
| 158 | Q | A | -1.3257 | |
| 159 | C | A | 0.0000 | |
| 160 | T | A | -0.8039 | |
| 161 | L | A | 0.0000 | |
| 162 | S | A | 0.1223 | |
| 163 | N | A | 0.0000 | |
| 164 | P | A | 0.5445 | |
| 165 | L | A | 0.7708 | |
| 166 | F | A | 0.1876 | |
| 167 | N | A | -0.7911 | |
| 168 | T | A | -0.6609 | |
| 169 | T | A | -0.7576 | |
| 170 | S | A | -0.2367 | |
| 171 | S | A | -0.5754 | |
| 172 | I | A | -0.0452 | |
| 173 | I | A | 0.0187 | |
| 174 | L | A | 0.0000 | |
| 175 | T | A | -0.0814 | |
| 176 | T | A | 0.2523 | |
| 177 | C | A | 0.0000 | |
| 178 | I | A | 0.6836 | |
| 179 | P | A | -0.0925 | |
| 180 | S | A | -0.5527 | |
| 181 | S | A | -0.8118 | |
| 182 | G | A | -1.4579 | |
| 183 | H | A | -2.1142 | |
| 184 | S | A | -2.2860 | |
| 185 | R | A | -3.3497 | |
| 186 | H | A | -3.0049 | |
| 187 | R | A | -2.8998 |