Project name: d744809fd56732d [mutate: SC5A]

Status: done

Started: 2024-06-20 13:29:08
Settings
Chain sequence(s) A: SAVKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues SC5A
Energy difference between WT (input) and mutated protein (by FoldX) -0.150156 kcal/mol
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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:00:17)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:17)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:32)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:33)
Show buried residues

Minimal score value
-3.7769
Maximal score value
0.8214
Average score
-1.3508
Total score value
-74.2919

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
5 C A -0.5651 mutated: SC5A
6 A A -0.7087
7 V A 0.0000
8 K A -1.3527
9 A A 0.0000
10 L A -0.8311
11 F A -0.6863
12 D A -2.2509
13 Y A 0.0000
14 K A -2.5614
15 A A -2.4630
16 Q A -3.0746
17 R A -3.7769
18 E A -3.3481
19 D A -2.7245
20 E A 0.0000
21 L A 0.0000
22 T A -1.2412
23 F A 0.0000
24 T A -1.5380
25 K A -1.7846
26 S A -0.9857
27 A A 0.0000
28 I A 0.8214
29 I A 0.0000
30 Q A -1.0943
31 N A -1.9763
32 V A -1.8409
33 E A -2.8038
34 K A -3.1333
35 Q A -2.5808
36 D A -2.5437
37 G A -1.6654
38 G A -1.3253
39 W A -0.9770
40 W A -1.5733
41 R A -1.8160
42 G A 0.0000
43 D A -1.6597
44 Y A -0.6692
45 G A -0.8153
46 G A -1.3497
47 K A -1.8861
48 K A -2.6198
49 Q A -1.9143
50 L A -1.2235
51 W A -0.8754
52 F A 0.0000
53 P A 0.0000
54 S A -1.2957
55 N A -1.2402
56 Y A -0.8760
57 V A 0.0000
58 E A -2.8632
59 E A -2.6023
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Laboratory of Theory of Biopolymers 2018