Chain sequence(s) |
A: SAVKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEE
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | SC5A |
Energy difference between WT (input) and mutated protein (by FoldX) | -0.150156 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:17) [INFO] FoldX: Starting FoldX energy minimalization (00:00:17) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:32) [INFO] Main: Simulation completed successfully. (00:00:33) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
5 | C | A | -0.5651 | mutated: SC5A |
6 | A | A | -0.7087 | |
7 | V | A | 0.0000 | |
8 | K | A | -1.3527 | |
9 | A | A | 0.0000 | |
10 | L | A | -0.8311 | |
11 | F | A | -0.6863 | |
12 | D | A | -2.2509 | |
13 | Y | A | 0.0000 | |
14 | K | A | -2.5614 | |
15 | A | A | -2.4630 | |
16 | Q | A | -3.0746 | |
17 | R | A | -3.7769 | |
18 | E | A | -3.3481 | |
19 | D | A | -2.7245 | |
20 | E | A | 0.0000 | |
21 | L | A | 0.0000 | |
22 | T | A | -1.2412 | |
23 | F | A | 0.0000 | |
24 | T | A | -1.5380 | |
25 | K | A | -1.7846 | |
26 | S | A | -0.9857 | |
27 | A | A | 0.0000 | |
28 | I | A | 0.8214 | |
29 | I | A | 0.0000 | |
30 | Q | A | -1.0943 | |
31 | N | A | -1.9763 | |
32 | V | A | -1.8409 | |
33 | E | A | -2.8038 | |
34 | K | A | -3.1333 | |
35 | Q | A | -2.5808 | |
36 | D | A | -2.5437 | |
37 | G | A | -1.6654 | |
38 | G | A | -1.3253 | |
39 | W | A | -0.9770 | |
40 | W | A | -1.5733 | |
41 | R | A | -1.8160 | |
42 | G | A | 0.0000 | |
43 | D | A | -1.6597 | |
44 | Y | A | -0.6692 | |
45 | G | A | -0.8153 | |
46 | G | A | -1.3497 | |
47 | K | A | -1.8861 | |
48 | K | A | -2.6198 | |
49 | Q | A | -1.9143 | |
50 | L | A | -1.2235 | |
51 | W | A | -0.8754 | |
52 | F | A | 0.0000 | |
53 | P | A | 0.0000 | |
54 | S | A | -1.2957 | |
55 | N | A | -1.2402 | |
56 | Y | A | -0.8760 | |
57 | V | A | 0.0000 | |
58 | E | A | -2.8632 | |
59 | E | A | -2.6023 |