| Chain sequence(s) |
A: RRGPDGYSWICECSSGTYTCDADNCGNLCPSDWQLTLHCHRLDSST
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:27)
[INFO] Main: Simulation completed successfully. (00:00:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -2.6826 | |
| 2 | R | A | -2.7787 | |
| 3 | G | A | -2.3334 | |
| 4 | P | A | -1.6720 | |
| 5 | D | A | -1.4971 | |
| 6 | G | A | -1.3537 | |
| 7 | Y | A | -1.3794 | |
| 8 | S | A | -1.7641 | |
| 9 | W | A | -1.5326 | |
| 10 | I | A | -0.6708 | |
| 11 | C | A | 0.0000 | |
| 12 | E | A | -1.1660 | |
| 13 | C | A | 0.0000 | |
| 14 | S | A | -0.4524 | |
| 15 | S | A | -0.3438 | |
| 16 | G | A | -0.5710 | |
| 17 | T | A | -0.4483 | |
| 18 | Y | A | 0.0674 | |
| 19 | T | A | -0.7129 | |
| 20 | C | A | 0.0000 | |
| 21 | D | A | 0.0000 | |
| 22 | A | A | -1.8808 | |
| 23 | D | A | -2.3450 | |
| 24 | N | A | -2.0507 | |
| 25 | C | A | -1.1596 | |
| 26 | G | A | -1.4060 | |
| 27 | N | A | -1.7254 | |
| 28 | L | A | -0.3600 | |
| 29 | C | A | 0.0000 | |
| 30 | P | A | -1.0599 | |
| 31 | S | A | -1.4261 | |
| 32 | D | A | -1.9261 | |
| 33 | W | A | -0.7777 | |
| 34 | Q | A | -1.2055 | |
| 35 | L | A | -0.4066 | |
| 36 | T | A | -0.2409 | |
| 37 | L | A | -0.3615 | |
| 38 | H | A | -1.2454 | |
| 39 | C | A | -1.1852 | |
| 40 | H | A | -1.7135 | |
| 41 | R | A | -1.6537 | |
| 42 | L | A | -1.0174 | |
| 43 | D | A | -1.9540 | |
| 44 | S | A | -1.0675 | |
| 45 | S | A | -0.7733 | |
| 46 | T | A | -0.5001 |