Project name: 7ecdfe6de5e6e26

Status: done

Started: 2026-05-16 03:18:00
Settings
Chain sequence(s) A: RRGPDGYSWICECSSGTYTCDADNCGNLCPSDWQLTLHCHRLDSST
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:27)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:28)
Show buried residues

Minimal score value
-2.7787
Maximal score value
0.0674
Average score
-1.1029
Total score value
-50.7333

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 R A -2.6826
2 R A -2.7787
3 G A -2.3334
4 P A -1.6720
5 D A -1.4971
6 G A -1.3537
7 Y A -1.3794
8 S A -1.7641
9 W A -1.5326
10 I A -0.6708
11 C A 0.0000
12 E A -1.1660
13 C A 0.0000
14 S A -0.4524
15 S A -0.3438
16 G A -0.5710
17 T A -0.4483
18 Y A 0.0674
19 T A -0.7129
20 C A 0.0000
21 D A 0.0000
22 A A -1.8808
23 D A -2.3450
24 N A -2.0507
25 C A -1.1596
26 G A -1.4060
27 N A -1.7254
28 L A -0.3600
29 C A 0.0000
30 P A -1.0599
31 S A -1.4261
32 D A -1.9261
33 W A -0.7777
34 Q A -1.2055
35 L A -0.4066
36 T A -0.2409
37 L A -0.3615
38 H A -1.2454
39 C A -1.1852
40 H A -1.7135
41 R A -1.6537
42 L A -1.0174
43 D A -1.9540
44 S A -1.0675
45 S A -0.7733
46 T A -0.5001
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Laboratory of Theory of Biopolymers 2018