| Chain sequence(s) |
A: AATTKAVCVLLKGDGPVQGIINFEQKESNGPVKKKVWGSIKGLTEGLHGFHVHEFGDNNTAGCTSAGPHFNPLSRKHGGPKDEEERHVGDLGNVTADKDGVADVSIEEDSVISLSGDHHCCIIIGRTLVVHEEKADDLGKGGNNEESTKTGNAGSRLACGVIGIAQMATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:30:12)
[INFO] Main: Simulation completed successfully. (00:30:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -1.9562 | |
| 2 | T | A | 0.0000 | |
| 3 | K | A | -1.1296 | |
| 4 | A | A | 0.0000 | |
| 5 | V | A | 1.0768 | |
| 6 | C | A | 0.0000 | |
| 7 | V | A | 1.0953 | |
| 8 | L | A | 0.0000 | |
| 9 | K | A | -2.4662 | |
| 10 | G | A | -2.9325 | |
| 11 | D | A | -4.3900 | |
| 12 | G | A | -2.2335 | |
| 13 | P | A | -1.7477 | |
| 14 | V | A | 0.0000 | |
| 15 | Q | A | 0.0000 | |
| 16 | G | A | 0.0000 | |
| 17 | I | A | 1.4015 | |
| 18 | I | A | 0.0000 | |
| 19 | N | A | 0.3959 | |
| 20 | F | A | 0.0000 | |
| 21 | E | A | -1.8655 | |
| 22 | Q | A | 0.0000 | |
| 23 | K | A | -3.9098 | |
| 24 | E | A | -3.6565 | |
| 25 | S | A | -2.4097 | |
| 26 | N | A | -2.8817 | |
| 27 | G | A | 0.0000 | |
| 28 | P | A | 0.0000 | |
| 29 | V | A | 0.0000 | |
| 30 | K | A | -1.8923 | |
| 31 | V | A | 0.0000 | |
| 32 | W | A | 0.0668 | |
| 33 | G | A | 0.0000 | |
| 34 | S | A | -0.7412 | |
| 35 | I | A | 0.0000 | |
| 36 | K | A | -2.2409 | |
| 37 | G | A | -1.5609 | |
| 38 | L | A | 0.0000 | |
| 39 | T | A | -2.4505 | |
| 40 | E | A | -3.8688 | |
| 41 | G | A | 0.0000 | |
| 42 | L | A | -0.0778 | |
| 43 | H | A | 0.0000 | |
| 44 | G | A | 0.0000 | |
| 45 | F | A | 0.0000 | |
| 46 | H | A | 0.0000 | |
| 47 | V | A | 0.0000 | |
| 48 | H | A | 0.0000 | |
| 49 | E | A | 0.0000 | |
| 50 | F | A | 1.1963 | |
| 51 | G | A | 0.1241 | |
| 52 | D | A | -0.6276 | |
| 53 | N | A | -1.0654 | |
| 54 | T | A | -0.8161 | |
| 55 | A | A | -0.4937 | |
| 56 | G | A | -1.5090 | |
| 57 | C | A | -0.9965 | |
| 58 | T | A | -0.3515 | |
| 59 | S | A | 0.0000 | |
| 60 | A | A | 0.0000 | |
| 61 | G | A | -0.0259 | |
| 62 | P | A | -0.2504 | |
| 63 | H | A | 0.0000 | |
| 64 | F | A | 0.0000 | |
| 65 | N | A | -0.7240 | |
| 66 | P | A | -0.5606 | |
| 67 | L | A | -0.2147 | |
| 68 | S | A | -0.9858 | |
| 69 | R | A | -2.7630 | |
| 70 | K | A | -3.7162 | |
| 71 | H | A | 0.0000 | |
| 72 | G | A | 0.0000 | |
| 73 | G | A | 0.0000 | |
| 74 | P | A | 0.0000 | |
| 75 | K | A | -3.9739 | |
| 76 | D | A | 0.0000 | |
| 77 | E | A | -4.9625 | |
| 78 | E | A | 0.0000 | |
| 79 | R | A | 0.0000 | |
| 80 | H | A | 0.0000 | |
| 81 | V | A | 0.0000 | |
| 82 | G | A | 0.0000 | |
| 83 | D | A | 0.0000 | |
| 84 | L | A | 0.0000 | |
| 85 | G | A | 0.0000 | |
| 86 | N | A | -0.1548 | |
| 87 | V | A | 0.0000 | |
| 88 | T | A | -1.0063 | |
| 89 | A | A | 0.0000 | |
| 90 | D | A | -4.7572 | |
| 91 | K | A | -6.1650 | |
| 92 | D | A | -4.9801 | |
| 93 | G | A | 0.0000 | |
| 94 | V | A | -3.0385 | |
| 95 | A | A | 0.0000 | |
| 96 | D | A | -2.3588 | |
| 97 | V | A | 0.0000 | |
| 98 | S | A | -0.9040 | |
| 99 | I | A | -1.1452 | |
| 100 | E | A | -2.6084 | |
| 101 | D | A | 0.0000 | |
| 102 | S | A | -1.3474 | |
| 103 | V | A | 0.0000 | |
| 104 | I | A | 0.0000 | |
| 105 | S | A | 0.0000 | |
| 106 | L | A | 0.0000 | |
| 107 | S | A | -0.7886 | |
| 108 | G | A | -1.6834 | |
| 109 | D | A | -2.8652 | |
| 110 | H | A | -1.5143 | |
| 111 | C | A | -0.9134 | |
| 112 | I | A | 0.0000 | |
| 113 | I | A | 0.6731 | |
| 114 | G | A | 0.0000 | |
| 115 | R | A | 0.0887 | |
| 116 | T | A | 0.0000 | |
| 117 | L | A | 0.0000 | |
| 118 | V | A | 0.0000 | |
| 119 | V | A | 0.0000 | |
| 120 | H | A | 0.0000 | |
| 121 | E | A | -1.7422 | |
| 122 | K | A | -1.9537 | |
| 123 | A | A | 0.0000 | |
| 124 | D | A | 0.0000 | |
| 125 | D | A | 0.0000 | |
| 126 | L | A | -1.2041 | |
| 127 | G | A | -2.7004 | |
| 128 | K | A | -2.7502 | |
| 129 | G | A | -2.5852 | |
| 130 | G | A | -2.6295 | |
| 131 | N | A | -3.1316 | |
| 132 | E | A | -4.1086 | |
| 133 | E | A | -3.4034 | |
| 134 | S | A | 0.0000 | |
| 135 | T | A | 0.0000 | |
| 136 | K | A | -2.8979 | |
| 137 | T | A | -1.6651 | |
| 138 | G | A | 0.0000 | |
| 139 | N | A | -1.9765 | |
| 140 | A | A | 0.0000 | |
| 141 | G | A | -1.1095 | |
| 142 | S | A | -1.0136 | |
| 143 | R | A | -1.4404 | |
| 144 | L | A | -1.6934 | |
| 145 | A | A | 0.0000 | |
| 146 | C | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | V | A | 0.9708 | |
| 149 | I | A | 0.0000 | |
| 150 | G | A | 0.0000 | |
| 151 | I | A | 1.6703 | |
| 152 | A | A | 0.0000 | |
| 153 | Q | A | -2.1732 | |
| 1 | M | A | 1.0328 | |
| 2 | A | A | 0.1968 | |
| 3 | T | A | -1.1801 | |
| 4 | K | A | -1.0795 | |
| 5 | A | A | 0.0000 | |
| 6 | V | A | 1.0474 | |
| 7 | C | A | 0.0000 | |
| 8 | V | A | 1.1213 | |
| 9 | L | A | 0.0000 | |
| 10 | K | A | -2.3232 | |
| 11 | G | A | 0.0000 | |
| 12 | D | A | -4.3679 | |
| 13 | G | A | 0.0000 | |
| 14 | P | A | -1.7437 | |
| 15 | V | A | 0.0000 | |
| 16 | Q | A | -1.7143 | |
| 17 | G | A | 0.0000 | |
| 18 | I | A | 1.2617 | |
| 19 | I | A | 0.0000 | |
| 20 | N | A | 0.0000 | |
| 21 | F | A | 0.0000 | |
| 22 | E | A | -1.8778 | |
| 23 | Q | A | 0.0000 | |
| 24 | K | A | -3.8564 | |
| 25 | E | A | -3.5165 | |
| 26 | S | A | -2.1723 | |
| 27 | N | A | -2.8768 | |
| 28 | G | A | 0.0000 | |
| 29 | P | A | -2.0371 | |
| 30 | V | A | 0.0000 | |
| 31 | K | A | 0.0000 | |
| 32 | V | A | 0.0000 | |
| 33 | W | A | 0.0110 | |
| 34 | G | A | 0.0000 | |
| 35 | S | A | 0.0000 | |
| 36 | I | A | 0.0000 | |
| 37 | K | A | -2.4784 | |
| 38 | G | A | -1.5391 | |
| 39 | L | A | 0.0000 | |
| 40 | T | A | -2.4277 | |
| 41 | E | A | -3.9455 | |
| 42 | G | A | -1.5980 | |
| 43 | L | A | -0.2175 | |
| 44 | H | A | 0.0000 | |
| 45 | G | A | 0.0000 | |
| 46 | F | A | 0.0000 | |
| 47 | H | A | 0.0000 | |
| 48 | V | A | 0.0000 | |
| 49 | H | A | 0.0000 | |
| 50 | E | A | 0.0452 | |
| 51 | F | A | 1.0605 | |
| 52 | G | A | 0.0000 | |
| 53 | D | A | -0.6185 | |
| 54 | N | A | 0.0000 | |
| 55 | T | A | -0.8014 | |
| 56 | A | A | -0.5064 | |
| 57 | G | A | -1.5272 | |
| 58 | C | A | 0.0000 | |
| 59 | T | A | -0.4608 | |
| 60 | S | A | -0.3224 | |
| 61 | A | A | 0.0000 | |
| 62 | G | A | 0.0000 | |
| 63 | P | A | -0.2802 | |
| 64 | H | A | 0.0000 | |
| 65 | F | A | 0.0000 | |
| 66 | N | A | 0.0000 | |
| 67 | P | A | -0.5449 | |
| 68 | L | A | -0.0656 | |
| 69 | S | A | -0.9887 | |
| 70 | R | A | -2.8731 | |
| 71 | K | A | -3.3164 | |
| 72 | H | A | 0.0000 | |
| 73 | G | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | P | A | -2.3575 | |
| 76 | K | A | -3.9630 | |
| 77 | D | A | -3.4700 | |
| 78 | E | A | -5.0460 | |
| 79 | E | A | -3.9890 | |
| 80 | R | A | -3.0267 | |
| 81 | H | A | 0.0000 | |
| 82 | V | A | 0.0000 | |
| 83 | G | A | 0.0000 | |
| 84 | D | A | 0.0000 | |
| 85 | L | A | 0.0000 | |
| 86 | G | A | 0.0000 | |
| 87 | N | A | 0.0000 | |
| 88 | V | A | 0.0000 | |
| 89 | T | A | -1.1699 | |
| 90 | A | A | 0.0000 | |
| 91 | D | A | -5.0683 | |
| 92 | K | A | -6.1146 | |
| 93 | D | A | -5.1006 | |
| 94 | G | A | 0.0000 | |
| 95 | V | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | D | A | -2.6131 | |
| 98 | V | A | 0.0000 | |
| 99 | S | A | -0.8780 | |
| 100 | I | A | 0.0000 | |
| 101 | E | A | -2.7690 | |
| 102 | D | A | 0.0000 | |
| 103 | S | A | -1.4100 | |
| 104 | V | A | 0.0000 | |
| 105 | I | A | 0.0000 | |
| 106 | S | A | 0.0000 | |
| 107 | L | A | 0.0000 | |
| 108 | S | A | 0.0000 | |
| 109 | G | A | -1.7738 | |
| 110 | D | A | -3.0534 | |
| 111 | H | A | -1.4620 | |
| 112 | C | A | 0.0000 | |
| 113 | I | A | 0.0000 | |
| 114 | I | A | 0.6987 | |
| 115 | G | A | 0.3847 | |
| 116 | R | A | 0.0814 | |
| 117 | T | A | 0.0000 | |
| 118 | L | A | 0.0000 | |
| 119 | V | A | 0.0000 | |
| 120 | V | A | 0.0000 | |
| 121 | H | A | 0.0000 | |
| 122 | E | A | -1.6519 | |
| 123 | K | A | -1.8001 | |
| 124 | A | A | -0.7324 | |
| 125 | D | A | 0.0000 | |
| 126 | D | A | -1.6079 | |
| 127 | L | A | -1.1523 | |
| 128 | G | A | 0.0000 | |
| 129 | K | A | -3.2476 | |
| 130 | G | A | 0.0000 | |
| 131 | G | A | -2.7035 | |
| 132 | N | A | -3.4644 | |
| 133 | E | A | -4.2209 | |
| 134 | E | A | -3.2621 | |
| 135 | S | A | 0.0000 | |
| 136 | T | A | -3.2465 | |
| 137 | K | A | -2.8499 | |
| 138 | T | A | -1.5901 | |
| 139 | G | A | 0.0000 | |
| 140 | N | A | 0.0000 | |
| 141 | A | A | 0.0000 | |
| 142 | G | A | -1.1421 | |
| 143 | S | A | -1.0291 | |
| 144 | R | A | 0.0000 | |
| 145 | L | A | 0.0000 | |
| 146 | A | A | 0.0000 | |
| 147 | C | A | 0.0000 | |
| 148 | G | A | 0.0000 | |
| 149 | V | A | 0.9175 | |
| 150 | I | A | 0.0000 | |
| 151 | G | A | 0.9631 | |
| 152 | I | A | 1.6659 | |
| 153 | A | A | -0.4569 | |
| 154 | Q | A | -2.1896 |