| Chain sequence(s) |
A: GPLPLNPEPELKSTDEYVTPTDLYYIAETDLITETGNPTKDIVVDGKVETPRVSAYDWRVFLLKLPDPNKLPLPSPDFLDPSTEILIWQLKAIRIHKYGPLGKGTYGHPNFNALGDVTNPTAPQHEGADDTVALSFTPKLLQLYIIGDLPPIGVYEDVAEPEPGLPPGAPPPLKKVRTIIQHGDMADIGFGAKDFAKLEPRKNDVPDLILNTKTIRPDFEGMKAEPYGRRMFTYDRKESSKSVKLLRRCGPDLRPLPAAPPPSPLYVPPPPSSPFAVPPSTDYFTIPDRGEIKEEDLLFNKPIFLKKTEGKNNGVLWHNRLYITVLDNSRDTIETIKTQVSTPAVNVYDPANYVTSKRYTEEYKIELIVQLCKIPLTPETLALLRRLDPSILVDANLPDIPPVERPDPYAGLKFIEIDLTNKLSSNLELYDLGRLFLNE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2148 | |
| 2 | P | A | 0.4440 | |
| 3 | L | A | 1.4229 | |
| 4 | P | A | 0.6754 | |
| 5 | L | A | 0.8010 | |
| 6 | N | A | -1.0599 | |
| 7 | P | A | -1.7004 | |
| 8 | E | A | -2.5395 | |
| 9 | P | A | -2.2635 | |
| 10 | E | A | -2.1990 | |
| 11 | L | A | -0.9369 | |
| 12 | K | A | -1.6105 | |
| 13 | S | A | -1.9297 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -3.1792 | |
| 16 | E | A | -2.9150 | |
| 17 | Y | A | -1.6870 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.9406 | |
| 20 | P | A | -0.9251 | |
| 21 | T | A | -0.8835 | |
| 22 | D | A | -1.5688 | |
| 23 | L | A | -0.3828 | |
| 24 | Y | A | -0.0049 | |
| 25 | Y | A | 0.1683 | |
| 26 | I | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.1015 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.2479 | |
| 31 | L | A | 0.4126 | |
| 32 | I | A | 0.2355 | |
| 33 | T | A | -0.1345 | |
| 34 | E | A | -0.5907 | |
| 35 | T | A | -0.6269 | |
| 36 | G | A | 0.0000 | |
| 37 | N | A | 0.0000 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.6126 | |
| 40 | K | A | -2.0420 | |
| 41 | D | A | -1.4000 | |
| 42 | I | A | 0.2463 | |
| 43 | V | A | 1.0682 | |
| 44 | V | A | 0.3884 | |
| 45 | D | A | -1.5434 | |
| 46 | G | A | -1.0682 | |
| 47 | K | A | -1.2512 | |
| 48 | V | A | 0.2521 | |
| 49 | E | A | -1.0309 | |
| 50 | T | A | -0.7301 | |
| 51 | P | A | -1.0045 | |
| 52 | R | A | -1.6872 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | D | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -1.8449 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.2890 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.5439 | |
| 70 | K | A | -1.8048 | |
| 71 | L | A | -0.6273 | |
| 72 | P | A | -0.2971 | |
| 73 | L | A | -0.0647 | |
| 74 | P | A | -0.1940 | |
| 75 | S | A | -0.6501 | |
| 76 | P | A | -1.1694 | |
| 77 | D | A | -2.0198 | |
| 78 | F | A | -0.9582 | |
| 79 | L | A | 0.0000 | |
| 80 | D | A | -1.8712 | |
| 81 | P | A | -1.2238 | |
| 82 | S | A | -0.8233 | |
| 83 | T | A | -0.7383 | |
| 84 | E | A | -0.8382 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | Q | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | K | A | -0.5375 | |
| 92 | A | A | 0.0000 | |
| 93 | I | A | 0.0000 | |
| 94 | R | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | H | A | -0.3777 | |
| 97 | K | A | 0.0000 | |
| 98 | Y | A | 0.3719 | |
| 99 | G | A | -0.0959 | |
| 100 | P | A | -0.3023 | |
| 101 | L | A | -0.2177 | |
| 102 | G | A | -0.4980 | |
| 103 | K | A | -1.1334 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.3255 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.6619 | |
| 108 | H | A | -1.0203 | |
| 109 | P | A | -0.8188 | |
| 110 | N | A | -1.6243 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -0.7228 | |
| 116 | D | A | -0.6727 | |
| 117 | V | A | -0.0223 | |
| 118 | T | A | -0.5733 | |
| 119 | N | A | -1.1752 | |
| 120 | P | A | -0.8495 | |
| 121 | T | A | -0.6169 | |
| 122 | A | A | -0.7417 | |
| 123 | P | A | -1.0664 | |
| 124 | Q | A | -1.5437 | |
| 125 | H | A | -2.4021 | |
| 126 | E | A | -2.9490 | |
| 127 | G | A | -2.0234 | |
| 128 | A | A | -1.5311 | |
| 129 | D | A | -2.5031 | |
| 130 | D | A | -1.8750 | |
| 131 | T | A | -0.9832 | |
| 132 | V | A | 0.2250 | |
| 133 | A | A | 0.0201 | |
| 134 | L | A | 0.0895 | |
| 135 | S | A | -0.1670 | |
| 136 | F | A | 0.0000 | |
| 137 | T | A | -0.2825 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | -1.0116 | |
| 140 | L | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | L | A | 0.0834 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | I | A | -0.3740 | |
| 153 | G | A | 0.0000 | |
| 154 | V | A | 0.0000 | |
| 155 | Y | A | 0.0000 | |
| 156 | E | A | -1.7667 | |
| 157 | D | A | 0.0000 | |
| 158 | V | A | -0.6051 | |
| 159 | A | A | -1.2336 | |
| 160 | E | A | -2.2956 | |
| 161 | P | A | -1.8409 | |
| 162 | E | A | -2.4613 | |
| 163 | P | A | -1.4901 | |
| 164 | G | A | -0.8403 | |
| 165 | L | A | -0.4063 | |
| 166 | P | A | -0.3290 | |
| 167 | P | A | -0.5197 | |
| 168 | G | A | -0.3901 | |
| 169 | A | A | -0.1406 | |
| 170 | P | A | 0.0244 | |
| 171 | P | A | -0.6636 | |
| 172 | P | A | -0.5037 | |
| 173 | L | A | -0.0345 | |
| 174 | K | A | -1.9343 | |
| 175 | K | A | -2.5696 | |
| 176 | V | A | -1.7797 | |
| 177 | R | A | -2.3186 | |
| 178 | T | A | -0.9330 | |
| 179 | I | A | -0.1594 | |
| 180 | I | A | 0.0000 | |
| 181 | Q | A | -0.7375 | |
| 182 | H | A | -0.8027 | |
| 183 | G | A | -0.8324 | |
| 184 | D | A | -0.9192 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.7877 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.3728 | |
| 190 | F | A | -0.0726 | |
| 191 | G | A | -0.6423 | |
| 192 | A | A | -1.1462 | |
| 193 | K | A | -1.3804 | |
| 194 | D | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | A | A | -1.9602 | |
| 197 | K | A | -2.2224 | |
| 198 | L | A | -1.2260 | |
| 199 | E | A | 0.0000 | |
| 200 | P | A | -2.0446 | |
| 201 | R | A | -2.5955 | |
| 202 | K | A | -3.2200 | |
| 203 | N | A | -1.9908 | |
| 204 | D | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.8752 | |
| 208 | L | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.6478 | |
| 211 | N | A | -2.0411 | |
| 212 | T | A | -1.3335 | |
| 213 | K | A | -1.5514 | |
| 214 | T | A | 0.0000 | |
| 215 | I | A | 0.0000 | |
| 216 | R | A | -1.3909 | |
| 217 | P | A | -0.8637 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | -1.3261 | |
| 220 | E | A | -2.3662 | |
| 221 | G | A | -1.7233 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.8126 | |
| 224 | A | A | -1.4749 | |
| 225 | E | A | -1.2802 | |
| 226 | P | A | -0.6004 | |
| 227 | Y | A | -0.6034 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.4028 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.7724 | |
| 234 | Y | A | -0.7828 | |
| 235 | D | A | -1.7466 | |
| 236 | R | A | -2.9006 | |
| 237 | K | A | -2.7339 | |
| 238 | E | A | -2.3506 | |
| 239 | S | A | -1.8339 | |
| 240 | S | A | -1.4200 | |
| 241 | K | A | -1.5096 | |
| 242 | S | A | -0.2345 | |
| 243 | V | A | 0.9504 | |
| 244 | K | A | -0.0149 | |
| 245 | L | A | 0.7572 | |
| 246 | L | A | 0.0000 | |
| 247 | R | A | 0.1580 | |
| 248 | R | A | -0.5039 | |
| 249 | C | A | -1.1679 | |
| 250 | G | A | -0.9623 | |
| 251 | P | A | -0.6732 | |
| 252 | D | A | -0.6858 | |
| 253 | L | A | 0.1950 | |
| 254 | R | A | -1.2981 | |
| 255 | P | A | -0.7718 | |
| 256 | L | A | 0.4599 | |
| 257 | P | A | 0.0956 | |
| 258 | A | A | 0.5134 | |
| 259 | A | A | 0.2731 | |
| 260 | P | A | -0.2190 | |
| 261 | P | A | 0.0668 | |
| 262 | P | A | 0.1221 | |
| 263 | S | A | 0.7107 | |
| 264 | P | A | 0.7614 | |
| 265 | L | A | 1.9126 | |
| 266 | Y | A | 1.7945 | |
| 267 | V | A | 1.9511 | |
| 268 | P | A | 1.2598 | |
| 269 | P | A | 0.7631 | |
| 270 | P | A | -0.0525 | |
| 271 | P | A | 0.0027 | |
| 272 | S | A | -0.2074 | |
| 273 | S | A | 0.4944 | |
| 274 | P | A | 0.8611 | |
| 275 | F | A | 2.2366 | |
| 276 | A | A | 1.4966 | |
| 277 | V | A | 2.3167 | |
| 278 | P | A | 1.3071 | |
| 279 | P | A | 0.1996 | |
| 280 | S | A | -0.3147 | |
| 281 | T | A | -0.0238 | |
| 282 | D | A | -0.1504 | |
| 283 | Y | A | 1.1894 | |
| 284 | F | A | 0.6682 | |
| 285 | T | A | 0.3655 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -0.9517 | |
| 289 | R | A | 0.0000 | |
| 290 | G | A | -1.4502 | |
| 291 | E | A | -2.3410 | |
| 292 | I | A | -2.2074 | |
| 293 | K | A | -3.2853 | |
| 294 | E | A | -3.5623 | |
| 295 | E | A | -3.7166 | |
| 296 | D | A | -3.3039 | |
| 297 | L | A | 0.0000 | |
| 298 | L | A | -1.6705 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.0520 | |
| 301 | K | A | -1.3759 | |
| 302 | P | A | -0.5013 | |
| 303 | I | A | -0.0449 | |
| 304 | F | A | -0.3118 | |
| 305 | L | A | 0.0000 | |
| 306 | K | A | -2.4442 | |
| 307 | K | A | -3.2822 | |
| 308 | T | A | 0.0000 | |
| 309 | E | A | -2.7662 | |
| 310 | G | A | -2.2086 | |
| 311 | K | A | -2.1485 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | -1.9276 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7602 | |
| 319 | N | A | -0.8343 | |
| 320 | R | A | -0.9316 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | D | A | 0.0000 | |
| 332 | T | A | -0.7308 | |
| 333 | I | A | -1.0688 | |
| 334 | E | A | -1.9441 | |
| 335 | T | A | -1.0564 | |
| 336 | I | A | 0.0402 | |
| 337 | K | A | -0.6284 | |
| 338 | T | A | 0.3068 | |
| 339 | Q | A | 0.3953 | |
| 340 | V | A | 1.6758 | |
| 341 | S | A | 0.6382 | |
| 342 | T | A | 0.1213 | |
| 343 | P | A | -0.1523 | |
| 344 | A | A | 0.1813 | |
| 345 | V | A | 0.6613 | |
| 346 | N | A | 0.0941 | |
| 347 | V | A | 1.7694 | |
| 348 | Y | A | 1.5894 | |
| 349 | D | A | 0.0807 | |
| 350 | P | A | -0.0385 | |
| 351 | A | A | 0.3396 | |
| 352 | N | A | 0.5598 | |
| 353 | Y | A | 1.1016 | |
| 354 | V | A | 1.6227 | |
| 355 | T | A | 0.1258 | |
| 356 | S | A | -0.8010 | |
| 357 | K | A | -2.0985 | |
| 358 | R | A | -1.9111 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.6368 | |
| 361 | E | A | 0.0000 | |
| 362 | E | A | -0.0972 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -0.4761 | |
| 365 | I | A | 0.0000 | |
| 366 | E | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3981 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.5899 | |
| 376 | L | A | -0.3422 | |
| 377 | T | A | -0.6415 | |
| 378 | P | A | -1.0023 | |
| 379 | E | A | -1.7761 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -0.9865 | |
| 382 | A | A | -1.4144 | |
| 383 | L | A | -1.4956 | |
| 384 | L | A | 0.0000 | |
| 385 | R | A | -2.5239 | |
| 386 | R | A | -2.2266 | |
| 387 | L | A | -1.1426 | |
| 388 | D | A | -1.3577 | |
| 389 | P | A | -1.5486 | |
| 390 | S | A | -0.7679 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -1.0018 | |
| 394 | D | A | -1.2380 | |
| 395 | A | A | -1.3555 | |
| 396 | N | A | -1.8604 | |
| 397 | L | A | -1.2793 | |
| 398 | P | A | -1.3467 | |
| 399 | D | A | -1.9258 | |
| 400 | I | A | -0.7680 | |
| 401 | P | A | -0.5342 | |
| 402 | P | A | -0.4829 | |
| 403 | V | A | 0.4894 | |
| 404 | E | A | -1.5202 | |
| 405 | R | A | -1.4860 | |
| 406 | P | A | -1.1718 | |
| 407 | D | A | -1.1629 | |
| 408 | P | A | -0.6214 | |
| 409 | Y | A | -0.3164 | |
| 410 | A | A | -0.5213 | |
| 411 | G | A | -0.6694 | |
| 412 | L | A | -0.6079 | |
| 413 | K | A | -1.8154 | |
| 414 | F | A | -1.0609 | |
| 415 | I | A | -1.0619 | |
| 416 | E | A | -2.2953 | |
| 417 | I | A | -1.8519 | |
| 418 | D | A | -2.6948 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.5246 | |
| 421 | N | A | -1.8334 | |
| 422 | K | A | -1.5574 | |
| 423 | L | A | -0.6102 | |
| 424 | S | A | -0.3654 | |
| 425 | S | A | -0.4036 | |
| 426 | N | A | -1.0443 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -1.5535 | |
| 429 | L | A | 0.0125 | |
| 430 | Y | A | -0.6141 | |
| 431 | D | A | -1.3089 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6036 | |
| 435 | L | A | -0.6881 | |
| 436 | F | A | -0.4074 | |
| 437 | L | A | -0.0936 | |
| 438 | N | A | -1.4420 | |
| 439 | E | A | -1.7946 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine