| Chain sequence(s) |
H: EVLLVESGGGLVKPGGSLKLSCAASGFTFRTSAMSWVRQTPERRLEWVASISSGGSYTFYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAIYYCARDYDSYDYAMDYWGQGTSVAVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:34)
[INFO] Main: Simulation completed successfully. (00:01:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.6276 | |
| 2 | V | H | -0.2343 | |
| 3 | L | H | 0.6169 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0629 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.4711 | |
| 8 | G | H | -0.9279 | |
| 9 | G | H | -0.3410 | |
| 10 | G | H | 0.3006 | |
| 11 | L | H | 1.1154 | |
| 12 | V | H | -0.2802 | |
| 13 | K | H | -1.8837 | |
| 14 | P | H | -1.8911 | |
| 15 | G | H | -1.5137 | |
| 16 | G | H | -0.9901 | |
| 17 | S | H | -1.0996 | |
| 18 | L | H | -0.7340 | |
| 19 | K | H | -1.8788 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.3115 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | 0.1345 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.3559 | |
| 26 | G | H | -0.7041 | |
| 27 | F | H | -0.4350 | |
| 28 | T | H | -0.7067 | |
| 29 | F | H | 0.0000 | |
| 30 | R | H | -2.5101 | |
| 31 | T | H | -1.3199 | |
| 32 | S | H | 0.0000 | |
| 33 | A | H | -0.6064 | |
| 34 | M | H | 0.0000 | |
| 35 | S | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | R | H | 0.0000 | |
| 39 | Q | H | -1.2521 | |
| 40 | T | H | 0.0000 | |
| 41 | P | H | -2.1577 | |
| 42 | E | H | -3.3223 | |
| 43 | R | H | -3.5249 | |
| 44 | R | H | -2.9727 | |
| 45 | L | H | -0.6489 | |
| 46 | E | H | -0.2824 | |
| 47 | W | H | 0.4435 | |
| 48 | V | H | 0.0000 | |
| 49 | A | H | 0.0000 | |
| 50 | S | H | 0.5460 | |
| 51 | I | H | 0.0000 | |
| 52 | S | H | -0.0742 | |
| 53 | S | H | -0.9189 | |
| 54 | G | H | -1.0579 | |
| 55 | G | H | -0.5823 | |
| 56 | S | H | 0.1401 | |
| 57 | Y | H | 1.2887 | |
| 58 | T | H | 1.0929 | |
| 59 | F | H | 1.0488 | |
| 60 | Y | H | -0.3156 | |
| 61 | P | H | -1.0977 | |
| 62 | D | H | -2.4245 | |
| 63 | S | H | -1.7522 | |
| 64 | V | H | 0.0000 | |
| 65 | K | H | -2.4657 | |
| 66 | G | H | -1.7132 | |
| 67 | R | H | -1.4723 | |
| 68 | F | H | 0.0000 | |
| 69 | T | H | -0.6152 | |
| 70 | I | H | 0.0000 | |
| 71 | S | H | -0.2812 | |
| 72 | R | H | -1.1908 | |
| 73 | D | H | -1.7159 | |
| 74 | N | H | -2.1675 | |
| 75 | A | H | -1.5922 | |
| 76 | K | H | -2.4213 | |
| 77 | N | H | -1.9569 | |
| 78 | T | H | -1.1199 | |
| 79 | L | H | 0.0000 | |
| 80 | Y | H | -0.3511 | |
| 81 | L | H | 0.0000 | |
| 82 | Q | H | -1.0524 | |
| 83 | M | H | 0.0000 | |
| 84 | S | H | -0.9906 | |
| 85 | S | H | -1.1408 | |
| 86 | L | H | 0.0000 | |
| 87 | R | H | -2.7363 | |
| 88 | S | H | -2.2010 | |
| 89 | E | H | -2.5014 | |
| 90 | D | H | 0.0000 | |
| 91 | T | H | -0.7541 | |
| 92 | A | H | 0.0000 | |
| 93 | I | H | 0.2365 | |
| 94 | Y | H | 0.0000 | |
| 95 | Y | H | 0.2968 | |
| 96 | C | H | 0.0000 | |
| 97 | A | H | 0.0000 | |
| 98 | R | H | -0.1405 | |
| 99 | D | H | -0.1481 | |
| 100 | Y | H | 0.6300 | |
| 101 | D | H | -0.9745 | |
| 102 | S | H | 0.0767 | |
| 103 | Y | H | 1.2053 | |
| 104 | D | H | 0.5979 | |
| 105 | Y | H | 1.4497 | |
| 106 | A | H | 1.0316 | |
| 107 | M | H | 0.8456 | |
| 108 | D | H | 0.4351 | |
| 109 | Y | H | 1.1444 | |
| 110 | W | H | 0.8192 | |
| 111 | G | H | 0.3706 | |
| 112 | Q | H | -0.6095 | |
| 113 | G | H | 0.0000 | |
| 114 | T | H | -0.1531 | |
| 115 | S | H | 0.0019 | |
| 116 | V | H | 0.0000 | |
| 117 | A | H | -0.1387 | |
| 118 | V | H | 0.0000 | |
| 119 | S | H | -0.9286 | |
| 120 | S | H | -0.8922 |