Project name: query_structure

Status: done

Started: 2026-03-16 23:51:44
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Chain sequence(s) A: LQVDIVPSQGEISVGESKFFLCQVAGSGSHIRISWFSPNGEKLTPNQQRISVVWNDDSSSTLTIYNANIDDAGIYKCVVWRTGGYRHRALVLGEATVNVKIFQ
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:38)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:40)
Show buried residues

Minimal score value
-3.4177
Maximal score value
2.0587
Average score
-0.795
Total score value
-81.885

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 0.4996
2 Q A -1.0875
3 V A -1.3476
4 D A -1.2197
5 I A 0.0000
6 V A 1.4091
7 P A 0.5714
8 S A -0.5414
9 Q A -1.8836
10 G A 0.0000
11 E A -2.8196
12 I A 0.0000
13 S A -1.0609
14 V A -0.3448
15 G A -1.2960
16 E A -2.2197
17 S A -0.9679
18 K A -0.3250
19 F A 2.0587
20 F A 0.0000
21 L A 0.9757
22 C A 0.0000
23 Q A -1.5331
24 V A 0.0000
25 A A -0.5727
26 G A -0.4952
27 S A -0.6999
28 G A -1.0421
29 S A -1.4094
30 H A -2.0389
31 I A -1.5232
32 R A -1.8636
33 I A 0.0000
34 S A 0.0000
35 W A 0.0000
36 F A -1.2062
37 S A -1.2544
38 P A -1.3007
39 N A -2.0262
40 G A -2.1193
41 E A -2.9365
42 K A -2.1910
43 L A -1.2917
44 T A -0.9205
45 P A -0.9174
46 N A -1.9574
47 Q A -2.0270
48 Q A -2.0909
49 R A -1.4609
50 I A 0.0000
51 S A -0.2297
52 V A 0.0000
53 V A 0.7322
54 W A -0.6700
55 N A -1.9236
56 D A -3.0515
57 D A -3.4177
58 S A -2.2379
59 S A 0.0000
60 S A 0.0000
61 T A 0.7359
62 L A 0.0000
63 T A 0.9154
64 I A 0.0000
65 Y A -0.5588
66 N A -1.9268
67 A A 0.0000
68 N A -0.9423
69 I A -0.0279
70 D A -1.4214
71 D A 0.0000
72 A A -0.9519
73 G A -0.5879
74 I A 0.0330
75 Y A 0.0000
76 K A -1.2040
77 C A 0.0000
78 V A 0.0000
79 V A 0.0000
80 W A -0.3177
81 R A -1.0748
82 T A -1.5116
83 G A -1.6148
84 G A -1.3283
85 Y A -0.4090
86 R A -2.5104
87 H A -2.5060
88 R A -2.4963
89 A A -0.8549
90 L A 1.1163
91 V A 1.1052
92 L A 0.8195
93 G A -0.3409
94 E A -1.8726
95 A A -1.6471
96 T A -0.7751
97 V A 0.0000
98 N A -1.7539
99 V A 0.0000
100 K A -2.1264
101 I A 0.0000
102 F A -0.2081
103 Q A -0.3658
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Laboratory of Theory of Biopolymers 2018