| Chain sequence(s) |
A: LQVDIVPSQGEISVGESKFFLCQVAGSGSHIRISWFSPNGEKLTPNQQRISVVWNDDSSSTLTIYNANIDDAGIYKCVVWRTGGYRHRALVLGEATVNVKIFQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:38)
[INFO] Main: Simulation completed successfully. (00:02:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.4996 | |
| 2 | Q | A | -1.0875 | |
| 3 | V | A | -1.3476 | |
| 4 | D | A | -1.2197 | |
| 5 | I | A | 0.0000 | |
| 6 | V | A | 1.4091 | |
| 7 | P | A | 0.5714 | |
| 8 | S | A | -0.5414 | |
| 9 | Q | A | -1.8836 | |
| 10 | G | A | 0.0000 | |
| 11 | E | A | -2.8196 | |
| 12 | I | A | 0.0000 | |
| 13 | S | A | -1.0609 | |
| 14 | V | A | -0.3448 | |
| 15 | G | A | -1.2960 | |
| 16 | E | A | -2.2197 | |
| 17 | S | A | -0.9679 | |
| 18 | K | A | -0.3250 | |
| 19 | F | A | 2.0587 | |
| 20 | F | A | 0.0000 | |
| 21 | L | A | 0.9757 | |
| 22 | C | A | 0.0000 | |
| 23 | Q | A | -1.5331 | |
| 24 | V | A | 0.0000 | |
| 25 | A | A | -0.5727 | |
| 26 | G | A | -0.4952 | |
| 27 | S | A | -0.6999 | |
| 28 | G | A | -1.0421 | |
| 29 | S | A | -1.4094 | |
| 30 | H | A | -2.0389 | |
| 31 | I | A | -1.5232 | |
| 32 | R | A | -1.8636 | |
| 33 | I | A | 0.0000 | |
| 34 | S | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | F | A | -1.2062 | |
| 37 | S | A | -1.2544 | |
| 38 | P | A | -1.3007 | |
| 39 | N | A | -2.0262 | |
| 40 | G | A | -2.1193 | |
| 41 | E | A | -2.9365 | |
| 42 | K | A | -2.1910 | |
| 43 | L | A | -1.2917 | |
| 44 | T | A | -0.9205 | |
| 45 | P | A | -0.9174 | |
| 46 | N | A | -1.9574 | |
| 47 | Q | A | -2.0270 | |
| 48 | Q | A | -2.0909 | |
| 49 | R | A | -1.4609 | |
| 50 | I | A | 0.0000 | |
| 51 | S | A | -0.2297 | |
| 52 | V | A | 0.0000 | |
| 53 | V | A | 0.7322 | |
| 54 | W | A | -0.6700 | |
| 55 | N | A | -1.9236 | |
| 56 | D | A | -3.0515 | |
| 57 | D | A | -3.4177 | |
| 58 | S | A | -2.2379 | |
| 59 | S | A | 0.0000 | |
| 60 | S | A | 0.0000 | |
| 61 | T | A | 0.7359 | |
| 62 | L | A | 0.0000 | |
| 63 | T | A | 0.9154 | |
| 64 | I | A | 0.0000 | |
| 65 | Y | A | -0.5588 | |
| 66 | N | A | -1.9268 | |
| 67 | A | A | 0.0000 | |
| 68 | N | A | -0.9423 | |
| 69 | I | A | -0.0279 | |
| 70 | D | A | -1.4214 | |
| 71 | D | A | 0.0000 | |
| 72 | A | A | -0.9519 | |
| 73 | G | A | -0.5879 | |
| 74 | I | A | 0.0330 | |
| 75 | Y | A | 0.0000 | |
| 76 | K | A | -1.2040 | |
| 77 | C | A | 0.0000 | |
| 78 | V | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | W | A | -0.3177 | |
| 81 | R | A | -1.0748 | |
| 82 | T | A | -1.5116 | |
| 83 | G | A | -1.6148 | |
| 84 | G | A | -1.3283 | |
| 85 | Y | A | -0.4090 | |
| 86 | R | A | -2.5104 | |
| 87 | H | A | -2.5060 | |
| 88 | R | A | -2.4963 | |
| 89 | A | A | -0.8549 | |
| 90 | L | A | 1.1163 | |
| 91 | V | A | 1.1052 | |
| 92 | L | A | 0.8195 | |
| 93 | G | A | -0.3409 | |
| 94 | E | A | -1.8726 | |
| 95 | A | A | -1.6471 | |
| 96 | T | A | -0.7751 | |
| 97 | V | A | 0.0000 | |
| 98 | N | A | -1.7539 | |
| 99 | V | A | 0.0000 | |
| 100 | K | A | -2.1264 | |
| 101 | I | A | 0.0000 | |
| 102 | F | A | -0.2081 | |
| 103 | Q | A | -0.3658 |