| Chain sequence(s) |
A: ESCVFIPCISGVIGCSCKSKVCYRNGIPCG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:16)
[INFO] Main: Simulation completed successfully. (00:00:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -0.1697 | |
| 2 | S | A | 0.3554 | |
| 3 | C | A | 1.0457 | |
| 4 | V | A | 1.4337 | |
| 5 | F | A | 2.7397 | |
| 6 | I | A | 2.7086 | |
| 7 | P | A | 1.5348 | |
| 8 | C | A | 1.7957 | |
| 9 | I | A | 2.8196 | |
| 10 | S | A | 1.8430 | |
| 11 | G | A | 1.6974 | |
| 12 | V | A | 3.0013 | |
| 13 | I | A | 2.7553 | |
| 14 | G | A | 0.7899 | |
| 15 | C | A | 0.0000 | |
| 16 | S | A | -0.2583 | |
| 17 | C | A | -0.3224 | |
| 18 | K | A | -1.9471 | |
| 19 | S | A | -1.3513 | |
| 20 | K | A | -1.2250 | |
| 21 | V | A | -0.6282 | |
| 22 | C | A | 0.0000 | |
| 23 | Y | A | -0.7919 | |
| 24 | R | A | -1.2759 | |
| 25 | N | A | -1.5435 | |
| 26 | G | A | -0.7222 | |
| 27 | I | A | 0.9325 | |
| 28 | P | A | 0.0077 | |
| 29 | C | A | 0.1828 | |
| 30 | G | A | -0.4167 |