| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLVSWDAPAVTVVFYDITYGETGGNSPVQEFTVSGSKSTATISGLKPGVDYTITVYAKYLFWSGYSSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:28)
[INFO] Main: Simulation completed successfully. (00:01:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7772 | |
| 2 | S | A | 0.7736 | |
| 3 | S | A | 0.5905 | |
| 4 | V | A | 0.4446 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.6311 | |
| 7 | K | A | -2.6612 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9135 | |
| 10 | V | A | 0.0992 | |
| 11 | V | A | 1.5328 | |
| 12 | A | A | 0.8900 | |
| 13 | A | A | 0.3014 | |
| 14 | T | A | -0.3384 | |
| 15 | P | A | -1.1049 | |
| 16 | T | A | -0.9913 | |
| 17 | S | A | -0.5279 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7278 | |
| 20 | V | A | 0.0000 | |
| 21 | S | A | -0.9252 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.5839 | |
| 24 | A | A | -1.1980 | |
| 25 | P | A | 0.0043 | |
| 26 | A | A | 0.4392 | |
| 27 | V | A | 0.8148 | |
| 28 | T | A | 0.8146 | |
| 29 | V | A | 1.0239 | |
| 30 | V | A | 1.5061 | |
| 31 | F | A | 1.3534 | |
| 32 | Y | A | 0.0000 | |
| 33 | D | A | -0.0477 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.5729 | |
| 36 | Y | A | -0.3995 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.5785 | |
| 39 | T | A | -1.2384 | |
| 40 | G | A | -1.2319 | |
| 41 | G | A | -1.4075 | |
| 42 | N | A | -1.5463 | |
| 43 | S | A | -0.9248 | |
| 44 | P | A | -0.4211 | |
| 45 | V | A | 0.2584 | |
| 46 | Q | A | -1.1787 | |
| 47 | E | A | -1.7434 | |
| 48 | F | A | -0.5955 | |
| 49 | T | A | 0.0922 | |
| 50 | V | A | 0.2883 | |
| 51 | S | A | 0.0234 | |
| 52 | G | A | 0.0856 | |
| 53 | S | A | -0.5670 | |
| 54 | K | A | -1.4296 | |
| 55 | S | A | -1.0897 | |
| 56 | T | A | -0.6214 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2619 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6578 | |
| 61 | G | A | -1.0251 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3551 | |
| 64 | P | A | -1.6363 | |
| 65 | G | A | -1.4280 | |
| 66 | V | A | -1.3820 | |
| 67 | D | A | -2.0656 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.7623 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.1253 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.5411 | |
| 74 | A | A | 0.0000 | |
| 75 | K | A | 0.9848 | |
| 76 | Y | A | 0.0000 | |
| 77 | L | A | 2.7823 | |
| 78 | F | A | 3.0187 | |
| 79 | W | A | 2.2220 | |
| 80 | S | A | 1.0116 | |
| 81 | G | A | 0.8639 | |
| 82 | Y | A | 1.0602 | |
| 83 | S | A | 0.4814 | |
| 84 | S | A | 0.0933 | |
| 85 | P | A | 0.2178 | |
| 86 | I | A | 0.0921 | |
| 87 | S | A | -0.5002 | |
| 88 | I | A | -0.7230 | |
| 89 | N | A | -1.7173 | |
| 90 | Y | A | -1.4345 | |
| 91 | R | A | -2.4921 | |
| 92 | T | A | -1.6145 |