| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWYYPFCAFYYRITYGETGGNSPVQEFTVRYYRITYGETGGNSPVQEFTVPRSYKAPSATISGLKPGVDYTITVYAATCLGSYSRPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:58)
[INFO] Main: Simulation completed successfully. (00:00:59)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.2803 | |
| 2 | S | A | -0.4970 | |
| 3 | D | A | -1.5950 | |
| 4 | V | A | -1.2855 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -2.2270 | |
| 7 | D | A | -2.5312 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.7766 | |
| 10 | V | A | 0.1040 | |
| 11 | V | A | 1.5568 | |
| 12 | A | A | 0.9116 | |
| 13 | A | A | 0.3050 | |
| 14 | T | A | -0.3428 | |
| 15 | P | A | -1.1405 | |
| 16 | T | A | -0.9935 | |
| 17 | S | A | -0.5209 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7908 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.5219 | |
| 22 | W | A | 0.0000 | |
| 23 | Y | A | -0.2306 | |
| 24 | Y | A | 0.0000 | |
| 25 | P | A | 0.4223 | |
| 26 | F | A | 0.8901 | |
| 27 | C | A | 1.4298 | |
| 28 | A | A | 1.3095 | |
| 29 | F | A | 1.0131 | |
| 30 | Y | A | 0.1322 | |
| 31 | Y | A | 0.0000 | |
| 32 | R | A | -0.9140 | |
| 33 | I | A | 0.0000 | |
| 34 | T | A | -0.5448 | |
| 35 | Y | A | -0.2581 | |
| 36 | G | A | 0.0000 | |
| 37 | E | A | -1.4902 | |
| 38 | T | A | -1.2186 | |
| 39 | G | A | -1.2191 | |
| 40 | G | A | -1.3268 | |
| 41 | N | A | -1.5157 | |
| 42 | S | A | -0.8071 | |
| 43 | P | A | -0.2890 | |
| 44 | V | A | 0.4901 | |
| 45 | Q | A | -0.7936 | |
| 46 | E | A | -1.6914 | |
| 47 | F | A | -0.9101 | |
| 48 | T | A | -0.6240 | |
| 49 | V | A | -0.2840 | |
| 50 | R | A | -1.2050 | |
| 51 | Y | A | 0.3350 | |
| 52 | Y | A | 0.2610 | |
| 53 | R | A | -0.8931 | |
| 54 | I | A | 0.5022 | |
| 55 | T | A | 0.0393 | |
| 56 | Y | A | 0.6665 | |
| 57 | G | A | -0.8437 | |
| 58 | E | A | -2.0882 | |
| 59 | T | A | -1.3699 | |
| 60 | G | A | -1.7172 | |
| 61 | G | A | -1.8493 | |
| 62 | N | A | -1.7689 | |
| 63 | S | A | -1.1857 | |
| 64 | P | A | -0.6295 | |
| 65 | V | A | 0.3519 | |
| 66 | Q | A | -1.1338 | |
| 67 | E | A | -1.3875 | |
| 68 | F | A | -0.2674 | |
| 69 | T | A | -0.4891 | |
| 70 | V | A | -0.0098 | |
| 71 | P | A | -0.5498 | |
| 72 | R | A | -1.5355 | |
| 73 | S | A | -0.8459 | |
| 74 | Y | A | 0.0159 | |
| 75 | K | A | -1.2686 | |
| 76 | A | A | -0.5085 | |
| 77 | P | A | -0.0872 | |
| 78 | S | A | 0.0793 | |
| 79 | A | A | 0.0000 | |
| 80 | T | A | 0.2803 | |
| 81 | I | A | 0.0000 | |
| 82 | S | A | -0.6553 | |
| 83 | G | A | -1.0326 | |
| 84 | L | A | 0.0000 | |
| 85 | K | A | -2.3752 | |
| 86 | P | A | -1.6708 | |
| 87 | G | A | -1.4595 | |
| 88 | V | A | -1.4571 | |
| 89 | D | A | -2.0943 | |
| 90 | Y | A | 0.0000 | |
| 91 | T | A | -0.7168 | |
| 92 | I | A | 0.0000 | |
| 93 | T | A | -0.1797 | |
| 94 | V | A | 0.0000 | |
| 95 | Y | A | -0.0034 | |
| 96 | A | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | T | A | 0.0000 | |
| 99 | C | A | 1.6098 | |
| 100 | L | A | 1.7424 | |
| 101 | G | A | 0.5807 | |
| 102 | S | A | 0.1668 | |
| 103 | Y | A | 0.2286 | |
| 104 | S | A | 0.0000 | |
| 105 | R | A | -1.9401 | |
| 106 | P | A | -1.0161 | |
| 107 | I | A | -0.6595 | |
| 108 | S | A | -0.6635 | |
| 109 | I | A | -0.7352 | |
| 110 | N | A | -1.7316 | |
| 111 | Y | A | -1.5032 | |
| 112 | R | A | -2.5551 | |
| 113 | T | A | -1.5355 |